prot_C-tenellus_contig9338.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig9338.1.1
Unique Name	prot_C-tenellus_contig9338.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	632

Homology

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BLAST of mRNA_C-tenellus_contig9338.1.1 vs. uniprot
Match: D7FQ35_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ35_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 9.610e-13
Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = 0

Query:  482 RQRGLAFATCISSGVSSSREGMLDLAAAVDRKRKGLIRR-NKNYMNAAKQIANQKRGVTNSYKTEGSYTKYKKIVSFLVLLGIITGLGSRGIDRAIVEMQALRSWATEEENTL-GLTYSVRFVLFWLYMEAGVCLASLVTARYAPDIAGSGIP 632
            R RG A A+  SS ++S   G             G ++R +    N AK +++QKRGVT SYK+E  Y +Y KI  FLV++G++ GLGS GID  I     L     E+   L G +   +F  F LY      +A+++TA ++P + GSGIP
Sbjct:  520 RSRGGASASVASSHINSLGRGASGDGGGAGG---GTMKRPSARLQNEAKHVSDQKRGVTTSYKSEELYKQYHKISFFLVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSTGAKFFFFLLYDIILTGIAAMLTAYFSPGVEGSGIP 669

[Close]

BLAST of mRNA_C-tenellus_contig9338.1.1 vs. uniprot
Match: A0A6H5JIC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC8_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.880e-12
Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = 0

Query:  482 RQRGLAFATCISSGVSSSREGMLDLAAAVDRKRKGLIRR-NKNYMNAAKQIANQKRGVTNSYKTEGSYTKYKKIVSFLVLLGIITGLGSRGIDRAIVEMQALRSWATEEENTL-GLTYSVRFVLFWLYMEAGVCLASLVTARYAPDIAGSGIP 632
            R RG A A+  SS ++S   G  +          G ++R +    N AK  ++QKRGVT SYK+E  Y +Y KI  FLV++G++ GLGS GID  I     L     E+   L G +   +F  F LY      +A+++TA ++P + GSGIP
Sbjct:  525 RSRGGASASVASSYINSLGRGASEDGRGASG---GTMKRPSARLQNEAKHFSDQKRGVTTSYKSEELYKQYHKISFFLVVMGVVIGLGSHGIDEGIQIFVHLGEDIMEKGGALLGGSTGAKFFCFLLYDIILTGIAAMLTAYFSPGVEGSGIP 674

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig9338.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig9338.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQ35_ECTSI	9.610e-13	37.25	Chloride channel protein n=1 Tax=Ectocarpus silicu...	[more]
A0A6H5JIC8_9PHAE	1.880e-12	37.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.3080.10	Clc chloride channel	coord: 551..632 e-value: 1.8E-7 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..478
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..78
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 550..632

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig9338	contig	C-tenellus_contig9338:1649..5871 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig9338.1.1	mRNA_C-tenellus_contig9338.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig9338 1441..5871 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig9338.1.1 ID=prot_C-tenellus_contig9338.1.1|Name=mRNA_C-tenellus_contig9338.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=632bp
MSYHEPTIKGNTSETPTAGSERDGTSSANEGSGGGIVQDGRLRRMGSSSS
SFAGTGSVNHSDVPIRQRRYTMSTPIPSKAVQEGAPRHIPVCGQQHPPTR
KRSMSHLSGQHTNVRVEDVEDRERSFTHSSSLKPPRGKVSFTSKQGVIRK
HRATRSMPSVVDLFNLTQEQAPTLKTRAPTTDSMSAQPTLLQDPALELSR
PSPHPPPQPPPGGGDGGNLRVDRKDHLCSRYGSPHPPTGRDDGEQLLGLL
GSSDTQGSQESLGLGVLSEHYGVVPKQNNAFETNVDILDSGNRRQSLKLN
PEFPSSELLADLQENRARCMGSEEEPVVGGEGGGVGGGTQDGHGVGWEDS
DSNIVKERSQPPNSPGKRLRKHLSTVETSRNVPNDRFSCNTNDEGKDTEE
SPKGYRSPSSLSPVPDQCSAPLDCIPPLSKPSPPLPSQQHGDNHHSHGPS
TLSSVFAPVEDSDGSGGTDRISMQEEEPWPDRQRGLAFATCISSGVSSSR
EGMLDLAAAVDRKRKGLIRRNKNYMNAAKQIANQKRGVTNSYKTEGSYTK
YKKIVSFLVLLGIITGLGSRGIDRAIVEMQALRSWATEEENTLGLTYSVR
FVLFWLYMEAGVCLASLVTARYAPDIAGSGIP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014743	Cl-channel_core