prot_C-tenellus_contig9298.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig9298.1.1
Unique Name	prot_C-tenellus_contig9298.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	208

Homology

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: D8LRP9_ECTSI (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP9_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 3.530e-75
Identity = 119/172 (69.19%), Postives = 143/172 (83.14%), Query Frame = 0

Query:    2 SSIPLQCLQ-DDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            S IP +C   D +GGVILGIDEAGRGPVLGPM Y AA+W+ +D++E+SA GFDDSKAL+  +R  LF+RI +TP+VGWVLRL+SA+ELS KMCRK PYSLN ISHDAA E+IR  Q+  VK+ +V+VDTVGDP+ YQ+KLE+EFG  IKF VAKKADSLYKT SAASI+AKV
Sbjct:   35 SKIPPRCRGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEKEFGKGIKFVVAKKADSLYKTASAASIVAKV 206

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: A0A6V1NB11_HETAK (Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NB11_HETAK)

HSP 1 Score: 208 bits (530), Expect = 9.640e-64
Identity = 109/172 (63.37%), Postives = 135/172 (78.49%), Query Frame = 0

Query:   12 DKGG-VILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKVGLCFLFFAWV 182
            DKG   ILGIDEAGRGPV+GPMVY AA+W+ +D+EE+SAMGFDDSKAL+  +R  LF++IK+TP VGWV+R +SA+E+S +M RK P SLN IS+ AA++MI+ A  + V I KV+VDTVGDP++YQ +L R F  +I FTVAKKADSLYKTVSAASI AKV    L   WV
Sbjct:   30 DKGPECILGIDEAGRGPVMGPMVYGAAYWSKADDEEISAMGFDDSKALTADQRASLFDKIKETPSVGWVIRSISAEEISNQMLRKVPVSLNIISYAAAMQMIQTALDDGVNITKVYVDTVGDPAAYQERLTRHFKGAIDFTVAKKADSLYKTVSAASICAKVTRDRLLEGWV 201

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: K3WMP3_GLOUD (Ribonuclease n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMP3_GLOUD)

HSP 1 Score: 187 bits (475), Expect = 2.020e-55
Identity = 98/171 (57.31%), Postives = 129/171 (75.44%), Query Frame = 0

Query:    2 SSIPLQCLQDDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            S +P  CL      V+LGIDEAGRGPV+GPMVY AAFW  + N+E+SA+GFDDSKALS   R+ LFE++K   ++GW++R++SA+E+S KM R+T  +LN +S DAAI+MIR  Q++ V + +VFVDTVGDP  YQ  L ++F  +I+F V KKADSL+K VSAASI AKV
Sbjct:   21 SDVPENCLNGVP--VMLGIDEAGRGPVMGPMVYGAAFWPVAQNDEMSALGFDDSKALSAESREGLFEKMKANKELGWIVRMISAQEISDKMQRQTS-NLNEMSRDAAIQMIRETQAKGVNVKQVFVDTVGDPKWYQTFLTKQFNGTIEFRVEKKADSLFKVVSAASIAAKV 188

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: A0A835YL34_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL34_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.620e-54
Identity = 96/155 (61.94%), Postives = 118/155 (76.13%), Query Frame = 0

Query:   18 LGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            +GIDEAGRGPVLGPM Y AA+W+ +D+E +  +G+DDSKALS  +R+ L++ I    ++GWVLR+L A+ELSA+M R+ P+SLNAISH AA EMIR A    V +  V+VDTVGDP +Y   L REF   I FTVAKKADSLYKTVSAASI AKV
Sbjct:    1 MGIDEAGRGPVLGPMTYGAAYWSMNDDEAIKKLGYDDSKALSEDKREKLYKGIMAEQRIGWVLRVLGARELSARMLRRAPHSLNAISHAAAAEMIRHALGRAVALTHVYVDTVGDPDNYARALRREFPG-IGFTVAKKADSLYKTVSAASICAKV 154

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: A0A5D6XNI5_9STRA (Ribonuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNI5_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.290e-53
Identity = 98/171 (57.31%), Postives = 128/171 (74.85%), Query Frame = 0

Query:    2 SSIPLQCLQDDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            S++P  CL      V+LGIDEAGRGPVLGPMVY AAFW  + + ++SAMGFDDSKALS   R+ LF +++ T Q+GWV+RL+SA+E+S KM R+T  +LN +S +AAI+MIR  Q++ V +  V+VDTVGDP  YQ  L ++F  +I+F V KKADSL+K VSAASI AKV
Sbjct:   23 SAVPECCLHGAP--VMLGIDEAGRGPVLGPMVYGAAFWPVAQDAKLSAMGFDDSKALSAETREQLFAKMRATDQLGWVVRLISAQEISDKMQRQTS-NLNEMSRNAAIQMIRATQAKGVNVTHVYVDTVGDPKWYQTFLTKQFNGTIEFRVEKKADSLFKVVSAASIAAKV 190

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: A0A8K1FJ28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ28_PYTOL)

HSP 1 Score: 182 bits (462), Expect = 1.580e-53
Identity = 97/171 (56.73%), Postives = 129/171 (75.44%), Query Frame = 0

Query:    2 SSIPLQCLQDDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            S  P  CL D    V++GIDEAGRGPV+GPMVY AA+W   +N+ +SA+GFDDSKALS   R+ LFE++K   ++GW++RL+SA E+S KM R+T  +LN IS  AAI++I+  Q++ VK+ +VFVDTVGDP+ Y+N L + F  +I+F VAKKADSL+K VSAASI AKV
Sbjct:   16 SETPSNCLHDVP--VMIGIDEAGRGPVMGPMVYGAAYWPVDENDAMSALGFDDSKALSMETREALFEKMKANDRLGWMVRLISAAEISNKMQRQTS-NLNEISRKAAIQLIKEIQAKGVKVKQVFVDTVGDPTWYENYLTKYFNGTIEFRVAKKADSLFKVVSAASIAAKV 183

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: A0A3M6V9E7_9STRA (Ribonuclease n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9E7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.000e-53
Identity = 96/171 (56.14%), Postives = 122/171 (71.35%), Query Frame = 0

Query:    2 SSIPLQCLQDDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            S  P  CL +    V+LGIDEAGRGPV+GPMVY AA+W  S+NE +  +GFDDSKALS   R  LFE+++ T  +GW++RL+SA E+S KM R+T  +LN IS DAAI++I   Q +   + KVFVDTVGDP  YQ+ L + F  +I+F V KKADSL+K VSAASI AKV
Sbjct:   14 SDCPANCLNEVP--VMLGIDEAGRGPVMGPMVYGAAYWPVSENETMCTLGFDDSKALSAESRAQLFEKMRSTESLGWIVRLISAAEISDKMQRQTS-NLNEISRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQSFLTKHFNGTIEFRVEKKADSLFKVVSAASIAAKV 181

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: A0A3R7NFH8_9STRA (Ribonuclease n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NFH8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.080e-53
Identity = 98/171 (57.31%), Postives = 125/171 (73.10%), Query Frame = 0

Query:    2 SSIPLQCLQDDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            S  P  CL  D   V+LGIDEAGRGPV+GPMVY AA+W  +DN+ +SA+GFDDSKALS   R  LFE+++ T  +GW++RL+SA E+S KM R+T  +LN +S DAAI++I   Q + V + KVFVDTVGDP  YQ+ L + F  +I+F V KKADSL+K VSAASI AKV
Sbjct:   14 SDCPSSCL--DGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMRSTEGLGWIVRLISAAEISNKMQRQTS-NLNEMSRDAAIQLINEVQKKGVVVKKVFVDTVGDPRWYQSFLTKHFNGTIEFQVEKKADSLFKVVSAASIAAKV 181

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: A0A6A3Y691_9STRA (Ribonuclease n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y691_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.230e-53
Identity = 99/171 (57.89%), Postives = 124/171 (72.51%), Query Frame = 0

Query:    2 SSIPLQCLQDDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKFTVAKKADSLYKTVSAASIIAKV 172
            S  P +CL  D   VILGIDEAGRGPV+GPMVY AA+W  +DNE + A+GFDDSKALS   R  LFE+++ T  +GW++RL+SA E+S KM R+T  +LN IS DAAI++I   Q +   + KVFVDTVGDP  YQ+ L + F  +I+F V KKADSL+K VSAASI AKV
Sbjct:   14 SDCPSRCL--DGVPVILGIDEAGRGPVMGPMVYGAAYWPVADNEAMCALGFDDSKALSAESRAQLFEKMQSTEGLGWIVRLISAVEISDKMQRQTS-NLNEISRDAAIQLINEVQKKGTVVKKVFVDTVGDPRWYQSFLTKHFNGTIEFRVEKKADSLFKVVSAASIAAKV 181

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BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Match: W7TUP4_9STRA (Ribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.040e-52
Identity = 99/161 (61.49%), Postives = 120/161 (74.53%), Query Frame = 0

Query:   16 VILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAMGFDDSKALSGARRDDLFERIKKT-PQVGWVLRLLSAKELSAKMCRKTPYSLNAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGS---SIKFTVAKKADSLYKTVSAASIIAKV 172
            V LGIDEAGRGPVLGPMVY+AAFW   +++ + AMGFDDSKAL    RD LF+R+ +T  QVGWV+  + A E++ KM  + P SLN ISHD+A +M+ L  +E V + +VFVDTVGDP +YQ KLE  FG    +I FTVAKKADSLYKTVSAASI AKV
Sbjct:   68 VKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKV 228

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig9298.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRP9_ECTSI	3.530e-75	69.19	Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D...	[more]
A0A6V1NB11_HETAK	9.640e-64	63.37	Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=28...	[more]
K3WMP3_GLOUD	2.020e-55	57.31	Ribonuclease n=1 Tax=Globisporangium ultimum (stra...	[more]
A0A835YL34_9STRA	2.620e-54	61.94	Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ...	[more]
A0A5D6XNI5_9STRA	1.290e-53	57.31	Ribonuclease n=1 Tax=Pythium brassicum TaxID=14850...	[more]
A0A8K1FJ28_PYTOL	1.580e-53	56.73	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3M6V9E7_9STRA	3.000e-53	56.14	Ribonuclease n=1 Tax=Peronospora effusa TaxID=5428...	[more]
A0A3R7NFH8_9STRA	3.080e-53	57.31	Ribonuclease n=2 Tax=Phytophthora kernoviae TaxID=...	[more]
A0A6A3Y691_9STRA	4.230e-53	57.89	Ribonuclease n=3 Tax=Phytophthora TaxID=4783 RepID...	[more]
W7TUP4_9STRA	2.040e-52	61.49	Ribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024567	Ribonuclease HII/HIII domain	PFAM	PF01351	RNase_HII	coord: 18..172 e-value: 2.7E-41 score: 141.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..174 e-value: 4.7E-56 score: 191.6
IPR004649	Ribonuclease H2, subunit A	TIGRFAM	TIGR00729	TIGR00729	coord: 17..172 e-value: 8.1E-37 score: 125.2
IPR001352	Ribonuclease HII/HIII	PANTHER	PTHR10954	RIBONUCLEASE H2 SUBUNIT A	coord: 10..173
None	No IPR available	PANTHER	PTHR10954:SF7	RIBONUCLEASE H2 SUBUNIT A	coord: 10..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 168..190
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 191..207
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..167
None	No IPR available	CDD	cd07181	RNase_HII_eukaryota_like	coord: 18..172 e-value: 4.72526E-92 score: 266.692
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 16..173

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig9298	contig	C-tenellus_contig9298:1877..4789 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig9298.1.1	mRNA_C-tenellus_contig9298.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig9298 1668..5787 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig9298.1.1 ID=prot_C-tenellus_contig9298.1.1|Name=mRNA_C-tenellus_contig9298.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=208bp
MSSIPLQCLQDDKGGVILGIDEAGRGPVLGPMVYSAAFWADSDNEEVSAM
GFDDSKALSGARRDDLFERIKKTPQVGWVLRLLSAKELSAKMCRKTPYSL
NAISHDAAIEMIRLAQSENVKIAKVFVDTVGDPSSYQNKLEREFGSSIKF
TVAKKADSLYKTVSAASIIAKVGLCFLFFAWVACSVLTIVESILPGCSRY
CLYLMLD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024567	RNase_HII/HIII_dom
IPR036397	RNaseH_sf
IPR004649	RNase_H2_suA
IPR001352	RNase_HII/HIII
IPR012337	RNaseH-like_sf