prot_C-tenellus_contig9292.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9292.2.1
Unique Nameprot_C-tenellus_contig9292.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length170
Homology
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 5.460e-47
Identity = 84/169 (49.70%), Postives = 116/169 (68.64%), Query Frame = 0
Query:    2 HGMLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILGEPDA-MPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKATEHTIPIYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKVQANRREITVHIARLKPH 169
            H M AMY N+   +W+ LLPFVQLAHNTAY+TT+QETP YLMF R   LP+D+ILG P    P S  +YS++TV+NLQLAYEL R+N+ E + +      + + P ++ G +V +H+P+T +  PNPK + PW GPY V+ +L+PV+YRV       E TVH+ R+KP+
Sbjct:  902 HNMFAMYRNLACDNWSELLPFVQLAHNTAYSTTLQETPHYLMFGRAAKLPVDLILGVPSTPAPQSRLDYSRRTVENLQLAYELARRNLKERSSKQADANEKLSFPSFKFGDQVLVHRPYTESAGPNPKLISPWHGPYTVRAQLSPVIYRVSKPNEPTETTVHLGRMKPY 1070          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A6H5JGF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF6_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.170e-46
Identity = 84/169 (49.70%), Postives = 121/169 (71.60%), Query Frame = 0
Query:    2 HGMLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILGEP--DAMPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKATEHTIPIYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKVQANRREITVHIARLKP 168
            H MLAMYSN+    W+ LLPFVQLAHNTAY+ T++ETP YL+F R PTLP+++ LG P  DA P S  ++S++TV+NLQLAYEL R+N+ E T +   +  + + P +++G +V LH+P+   D PNPK + PW GP+ V+ +++PV+YRV    +  E+TVH+ R+KP
Sbjct:  711 HNMLAMYSNLACDIWSELLPFVQLAHNTAYSKTLEETPHYLVFGRAPTLPVELFLGVPATDA-PQSRLDHSRRTVENLQLAYELARRNLKERTDKQAVENEKLSFPSFKMGDQVLLHRPYNETDGPNPKLVSPWHGPFTVRSQISPVIYRVSKPNDPTEVTVHLGRMKP 878          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A1E1XVH4_9ACAR (RNA-directed DNA polymerase (Fragment) n=1 Tax=Amblyomma sculptum TaxID=1581419 RepID=A0A1E1XVH4_9ACAR)

HSP 1 Score: 98.6 bits (244), Expect = 7.670e-21
Identity = 67/174 (38.51%), Postives = 92/174 (52.87%), Query Frame = 0
Query:    4 MLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILG-EPDAMPIS-IQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKATEHTIPIYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKV------QANRREITVHIARLKPH 169
            ML+MY +   SDW  +LPF+  A+NTA  TT   +PF+L++ R P+ P+D +L   PD    + I E SK   +  QLA  LT    G    R +   T HT   +  G+ VWLH P TS    + K L  + GPY + +R +PV Y V        Q  R   TVH++RLKP+
Sbjct:  421 MLSMYVSSDHSDWDRILPFITYAYNTATQTTTGFSPFFLLYGREPSSPLDTVLPYRPDVSECTTISEASKHAEECRQLARSLTSGEQGRQKFRFD---TSHTHDSFLPGSLVWLHVPSTSPGLSS-KLLPKYHGPYRIVERTSPVNYIVDSVTPSTDQRRRSRETVHVSRLKPY 590          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A3M7SS01_BRAPC (Retrovirus-related Pol poly from transposon n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7SS01_BRAPC)

HSP 1 Score: 81.6 bits (200), Expect = 5.810e-15
Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 0
Query:    4 MLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILGEPDA-MPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKATEHTIPI-YEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKVQANRREITVHIARLK 167
            MLA Y    Q+ W   LP +  A+NTA + T   TPF +++ER+P LP+D++   P+  + +S+  Y+ +   +L   YEL  +  G    + +  A  +  P  Y VG  VWL          + K    W GPY V ++++ + YR+   +  ++  VH+ RLK
Sbjct:  223 MLACYVAYTQNKWDQYLPKLAFAYNTAVHATTGLTPFEVVYERKPKLPVDLMFPTPNLELNLSVDSYATKVQQHLLKCYELVERTSGSRIHKFKFYADRNVRPADYTVGDRVWLLN-DAKKKGVSKKLSRRWTGPYTVIEKMSDINYRIPPDSKGKKKLVHVNRLK 387          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A1X7SVM4_AMPQE (Integrase catalytic domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SVM4_AMPQE)

HSP 1 Score: 77.4 bits (189), Expect = 5.220e-14
Identity = 48/160 (30.00%), Postives = 81/160 (50.62%), Query Frame = 0
Query:   13 QSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIIL-GEPDAMPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKATEHTIPIY-EVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKVQANRREITVHIARLKPHK 170
            Q+DW + LP + +A+ TA + +   TPF+++F R P LP+D IL G  +  P S   Y       L   +   R++  +  ++ + +  + T   +  +G  V+LH P         K   PW GPY +  R++    R+++   R+ + VHI RLKP+K
Sbjct:   42 QADWDTHLPILLMAYRTAIHESTGFTPFHVLFGRSPKLPVDTILQGPAEDEPGSYPHYITNLKKVLHHTFRQVRESSTQAHVKQKMQYDKKTHDFHLRIGELVYLHTPAVKQGLSR-KLCSPWTGPYTIVDRISRYNVRIQLVGGRKNLVVHINRLKPYK 200          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A1E1X293_9ACAR (RNA-directed DNA polymerase (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1X293_9ACAR)

HSP 1 Score: 77.8 bits (190), Expect = 1.490e-13
Identity = 56/173 (32.37%), Postives = 87/173 (50.29%), Query Frame = 0
Query:    4 MLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILGEPDAMPISIQEYSKQTVDNLQLAYELTRQNI-GEMTLRNESKATEHTIPIYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKVQANR----REIT--VHIARLKPH 169
            MLAMY +    DW   LP+V  A+N++ + T   +P+YL+F R PTLP+D +L  P A+P +   Y+   + +   A ++ R  +    T +  +    H    YE G+ V L  P       + K L  + GP+ V +++T V Y +   A      R  T  VH+ARLKP+
Sbjct:  857 MLAMYVSPDHRDWDIALPYVTFAYNSSRHDTTGYSPYYLLFGRHPTLPLDTLLP-PSAVPTT--SYASDAIAHATQARQIARSRLHASQTYQKSAYDRRHRPVYYEPGSVVLLWSPARRVGL-SEKLLCKYSGPFRVVRQVTDVTYEIAPLAPSPSFPRTATDIVHVARLKPY 1025          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A4Y2CJX1_ARAVE (Integrase catalytic domain-containing protein n=4 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2CJX1_ARAVE)

HSP 1 Score: 75.9 bits (185), Expect = 1.640e-13
Identity = 48/172 (27.91%), Postives = 93/172 (54.07%), Query Frame = 0
Query:    4 MLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILGEPDAMPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKA-TEHTIPIYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVK---VQANRREI--TVHIARLKPH 169
            ML+MY++++Q +W ++LPFV  A+N+A   +   +PF+L++ R  T P+D+IL   +        Y +Q +   + A +L + +I +    ++ +    H    Y++G  VW++ P       + K L  + GPY + ++++ V Y V+       RR++   VH+ R+KP+
Sbjct:   49 MLSMYTDVEQKNWDTVLPFVTFAYNSAKQNSTGFSPFFLIYGRNITTPLDVILPHNNDQDHD-DSYVQQLITRSEEARQLAKIHIKDAQASDKRRYDARHRCVSYKIGDLVWVYTPIRKVGL-SEKLLRRYFGPYRITRQMSEVTYEVESMETDKKRRKLKDVVHVLRIKPY 218          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A8B6FGI7_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FGI7_MYTGA)

HSP 1 Score: 74.7 bits (182), Expect = 2.110e-13
Identity = 51/172 (29.65%), Postives = 81/172 (47.09%), Query Frame = 0
Query:    4 MLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILG-----EPDAMPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKATEHTIP-IYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKVQANRREITVHIARLKPH 169
            ML+++ N  ++DW   LP++ +A+ +    +    P  LMF R    PIDII G     E    P+   E+ K T   L L YE    N+     R +        P  ++ G+ VW   P  +      K    W GPY V+K+L+ V+Y++++   RR + VH+  LK +
Sbjct:    8 MLSIFVNDNRNDWDDHLPYLLMAYRSTIQDSTGFAPHKLMFGRDMMCPIDIISGFMPKNENILCPVQYVEWVKHT---LSLTYEFVNSNLNRAASRQKKNYDRGAKPRAFDEGSFVWRWYPPKAGL----KLALGWTGPYHVEKKLSDVLYKIRLLPERRFLVVHVDHLKSY 172          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A6G0W959_9STRA (RNA-directed DNA polymerase n=5 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W959_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.110e-13
Identity = 46/176 (26.14%), Postives = 98/176 (55.68%), Query Frame = 0
Query:    4 MLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIIL--GEPDAMPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKA----TEHTIPIYEVGAEVWLHKPHTSADAPN----PKSLFPWRGPYEVKKRLTPVVYRVKVQANRREI-TVHIARLKP 168
            ML ++ N  Q+DW + LP +  A+ TA++ T+ ++P++ +F R PTLP+D+     +P      + +Y ++    L  +++ TR+ + E  ++ ++K+    +E     ++  + VW++K  + +  P+    PK    W GPY V++++ P  Y++ +  +   + TV++ RL+P
Sbjct: 1306 MLKIFVNDHQTDWDTYLPRLLFAYRTAHHETLGDSPYFCLFGRDPTLPLDLAFLNSDPAWKSDDLPQYKRR----LASSWKQTRKLVEEQLIQGQNKSAIAKSEQRPVSFDEQSAVWVYKYFSKSSDPDDHRTPKLATHWHGPYRVERKMGPNTYKIAIPTHPDNVVTVNVDRLEP 1477          
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Match: A0A6J8AYC9_MYTCO (Integrase catalytic domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AYC9_MYTCO)

HSP 1 Score: 76.6 bits (187), Expect = 3.260e-13
Identity = 51/172 (29.65%), Postives = 83/172 (48.26%), Query Frame = 0
Query:    4 MLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTLPIDIILG-----EPDAMPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKATEHTIP-IYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRVKVQANRREITVHIARLKPH 169
            ML+++ N  ++DW   LP++ +A+ +    +    P  L+F R    PIDII G     E    P+   E+ K T   L L Y+    N+     R +        P  +E G+ VW   P  +      K    W GPY V+K+L+ V+Y++++  +RR + VH+  LKP+
Sbjct:  254 MLSIFVNDNRNDWDDHLPYLLMAYRSTIQDSTGFAPHKLLFGRDMMCPIDIISGFMPKNENILCPVQYVEWVKHT---LSLTYKFVNSNLNRAASRQKKNYDRGAKPRAFEEGSFVWRWYPPKAGL----KLALGWTGPYHVEKKLSDVLYKIRLLPDRRFLVVHVDHLKPY 418          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9292.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K112_9PHAE5.460e-4749.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGF6_9PHAE1.170e-4649.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1E1XVH4_9ACAR7.670e-2138.51RNA-directed DNA polymerase (Fragment) n=1 Tax=Amb... [more]
A0A3M7SS01_BRAPC5.810e-1530.72Retrovirus-related Pol poly from transposon n=1 Ta... [more]
A0A1X7SVM4_AMPQE5.220e-1430.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A1E1X293_9ACAR1.490e-1332.37RNA-directed DNA polymerase (Fragment) n=1 Tax=Amb... [more]
A0A4Y2CJX1_ARAVE1.640e-1327.91Integrase catalytic domain-containing protein n=4 ... [more]
A0A8B6FGI7_MYTGA2.110e-1329.65Uncharacterized protein n=1 Tax=Mytilus galloprovi... [more]
A0A6G0W959_9STRA2.110e-1326.14RNA-directed DNA polymerase n=5 Tax=Aphanomyces eu... [more]
A0A6J8AYC9_MYTCO3.260e-1329.65Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..88
e-value: 9.3E-8
score: 33.6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9292contigC-tenellus_contig9292:5279..5788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9292.2.1mRNA_C-tenellus_contig9292.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9292 4823..5788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9292.2.1 ID=prot_C-tenellus_contig9292.2.1|Name=mRNA_C-tenellus_contig9292.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=170bp
MHGMLAMYSNMKQSDWASLLPFVQLAHNTAYNTTVQETPFYLMFERRPTL
PIDIILGEPDAMPISIQEYSKQTVDNLQLAYELTRQNIGEMTLRNESKAT
EHTIPIYEVGAEVWLHKPHTSADAPNPKSLFPWRGPYEVKKRLTPVVYRV
KVQANRREITVHIARLKPHK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf