prot_C-tenellus_contig9290.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9290.1.2
Unique Nameprot_C-tenellus_contig9290.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length117
Homology
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A2D2AH38_9PHAE (Prolycopene isomerase-like1 n=1 Tax=Sargassum integerrimum TaxID=1159339 RepID=A0A2D2AH38_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.620e-45
Identity = 72/83 (86.75%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAA 83
            MW+ALE+IIPD+R+RTEVELVATPLTHE +NRRFRGSYGPGWRAG+ EFPGC+TPL+GLLHCGDSTLPG+GLPAVAASGMNAA
Sbjct:  392 MWKALEKIIPDVRRRTEVELVATPLTHEFFNRRFRGSYGPGWRAGQAEFPGCITPLKGLLHCGDSTLPGIGLPAVAASGMNAA 474          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A2D2AH28_9PHAE (Prolycopene isomerase-like1 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A2D2AH28_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 2.270e-45
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAARFV 86
            MW+ALERIIPD+RKRTEVELVATPLTHE +NRRF+GSYGPGWRAGE EFPGCVTPL+ LLHCGDSTLPGLGLPAVAASGM+AA  +
Sbjct:  392 MWKALERIIPDVRKRTEVELVATPLTHEFFNRRFKGSYGPGWRAGEAEFPGCVTPLKSLLHCGDSTLPGLGLPAVAASGMSAASTI 477          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A835Z9G8_9STRA (Amine oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G8_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.310e-36
Identity = 64/84 (76.19%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAAR 84
            +W ALERIIPDIR R EV L A+PLTHE +NRR RGSYGPGWRAGE  FPGC TP++ LL CGDSTLPGLG+PAVAASGM+AA 
Sbjct:  424 LWNALERIIPDIRARAEVTLPASPLTHEMFNRRHRGSYGPGWRAGEGTFPGCTTPIKDLLRCGDSTLPGLGVPAVAASGMHAAN 507          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A832M237_9CYAN (Carotene isomerase n=1 Tax=Oscillatoriales cyanobacterium SpSt-402 TaxID=2282168 RepID=A0A832M237_9CYAN)

HSP 1 Score: 126 bits (316), Expect = 1.120e-32
Identity = 60/84 (71.43%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAAR 84
            MW+ALER+IPD+R R E+ LV TPLTHE + RR RGSYGP  RAGE  FPG  TPL GLL CGDST PG+GLPAVAASGM AA 
Sbjct:  254 MWQALERVIPDVRSRCEITLVGTPLTHERFLRRHRGSYGPALRAGESLFPGAKTPLPGLLLCGDSTFPGIGLPAVAASGMIAAN 337          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A6P0QE82_9CYAN (NAD(P)/FAD-dependent oxidoreductase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QE82_9CYAN)

HSP 1 Score: 127 bits (318), Expect = 4.910e-32
Identity = 62/84 (73.81%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAAR 84
            MW+ALERIIPD+R R +V LV TPLTHE Y RR+RGSYGP  RAGE  FPG  TPL GLL CGDST PG+GLPAVAASGM AA 
Sbjct:  414 MWQALERIIPDVRSRCDVTLVGTPLTHERYLRRYRGSYGPAIRAGEGFFPGSGTPLPGLLCCGDSTFPGIGLPAVAASGMIAAN 497          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A3D1P5Z8_9CYAN (Carotene isomerase n=1 Tax=Cyanobacteria bacterium UBA11049 TaxID=2055787 RepID=A0A3D1P5Z8_9CYAN)

HSP 1 Score: 126 bits (317), Expect = 6.810e-32
Identity = 62/84 (73.81%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAAR 84
            MW+ALERIIPD+R RTEV LV TPLTHE Y RR RGSYGP  RAG+  FPG  TPL GLL CGDST PG+GLPAVAASG  AA 
Sbjct:  414 MWQALERIIPDVRSRTEVTLVGTPLTHERYLRRHRGSYGPAIRAGDNFFPGSNTPLRGLLCCGDSTFPGIGLPAVAASGAIAAN 497          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A7C3KEV6_9CYAN (FAD-dependent oxidoreductase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KEV6_9CYAN)

HSP 1 Score: 126 bits (316), Expect = 1.060e-31
Identity = 60/86 (69.77%), Postives = 67/86 (77.91%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAARFV 86
            MW+ALER+IPDIR+RTEV LV TPLTH  + RR RGSYGP  RAGE  FPGC TPL GL  CGDST PG+GLPAVAASG+  A  +
Sbjct:  424 MWQALERVIPDIRQRTEVALVGTPLTHARFLRRDRGSYGPALRAGESVFPGCRTPLAGLFCCGDSTFPGIGLPAVAASGLITANTI 509          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A7S1E1F7_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E1F7_HEMAN)

HSP 1 Score: 120 bits (302), Expect = 1.320e-31
Identity = 55/88 (62.50%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAARFVGV 88
            +W+A+ER+IPDIRKR +V LV TPLTHE + RR+RGSYGP  +AG++ FPG  TP++ LL CGDS  PG+G+PAVAASGM AA  +G+
Sbjct:  144 LWKAVERVIPDIRKRCDVSLVGTPLTHERFLRRYRGSYGPAIQAGKQIFPGPGTPIKNLLLCGDSVFPGIGIPAVAASGMVAANTLGL 231          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: A0A351L786_9CYAN (Carotene isomerase (Fragment) n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A351L786_9CYAN)

HSP 1 Score: 120 bits (300), Expect = 1.390e-31
Identity = 59/84 (70.24%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAAR 84
            MW+A+ER+I DIR R EV LV TPLTHE + RR RGSYGP  RAGE  FPG  TPL GL  CGDST PG+GLPAVAASGM AA 
Sbjct:  120 MWKAIERVIGDIRSRCEVTLVGTPLTHERFLRRHRGSYGPAIRAGEALFPGSNTPLAGLFCCGDSTFPGIGLPAVAASGMIAAN 203          
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Match: UPI001CFD0D34 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Microseira wollei TaxID=467598 RepID=UPI001CFD0D34)

HSP 1 Score: 125 bits (314), Expect = 1.780e-31
Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    1 MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFPGCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAAR 84
            MW+A+ER+IPDIR R EV LV TPLTHE + RR RGSYGP  RAGE  FPG  TPL GLL CGDST PG+GLPAVAASGM AA 
Sbjct:  414 MWKAIERVIPDIRSRCEVTLVGTPLTHERFLRRHRGSYGPAIRAGEAFFPGANTPLAGLLCCGDSTFPGIGLPAVAASGMIAAN 497          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9290.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D2AH38_9PHAE1.620e-4586.75Prolycopene isomerase-like1 n=1 Tax=Sargassum inte... [more]
A0A2D2AH28_9PHAE2.270e-4586.05Prolycopene isomerase-like1 n=2 Tax=Scytosiphonace... [more]
A0A835Z9G8_9STRA2.310e-3676.19Amine oxidase n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A832M237_9CYAN1.120e-3271.43Carotene isomerase n=1 Tax=Oscillatoriales cyanoba... [more]
A0A6P0QE82_9CYAN4.910e-3273.81NAD(P)/FAD-dependent oxidoreductase n=2 Tax=unclas... [more]
A0A3D1P5Z8_9CYAN6.810e-3273.81Carotene isomerase n=1 Tax=Cyanobacteria bacterium... [more]
A0A7C3KEV6_9CYAN1.060e-3169.77FAD-dependent oxidoreductase n=1 Tax=Oscillatorial... [more]
A0A7S1E1F7_HEMAN1.320e-3162.50Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A351L786_9CYAN1.390e-3170.24Carotene isomerase (Fragment) n=2 Tax=unclassified... [more]
UPI001CFD0D341.780e-3172.62NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Micros... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46313FAMILY NOT NAMEDcoord: 1..83
NoneNo IPR availablePANTHERPTHR46313:SF2CAROTENE ISOMERASEcoord: 1..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9290contigC-tenellus_contig9290:4086..4883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9290.1.2mRNA_C-tenellus_contig9290.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig9290 2659..4913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9290.1.2 ID=prot_C-tenellus_contig9290.1.2|Name=mRNA_C-tenellus_contig9290.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=117bp
MWRALERIIPDIRKRTEVELVATPLTHEHYNRRFRGSYGPGWRAGEEEFP
GCVTPLEGLLHCGDSTLPGLGLPAVAASGMNAARFVGVCPFVCTCVCVCV
LEASPLMPLRRLFVNE*
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