prot_C-tenellus_contig925.1.5 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig925.1.5
Unique Nameprot_C-tenellus_contig925.1.5
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length284
Homology
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: D7FK43_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK43_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 3.400e-89
Identity = 135/206 (65.53%), Postives = 159/206 (77.18%), Query Frame = 0
Query:   56 LTMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRLSRRLNPFTGESYLVNEQRQFASPLL 261
            +T TNVL  LN   YL QMR+P+IT AGWK+A AIT + QWYRLLTP+ LHGS  HL VNS S  +VGPVVE VMGKAKF+ +Y LAGI+GNVLSCIVNPR P+VGASGAIFGM+GAWGAF L N   +G   + RAL  V QTVMIN++ GM S QIDNMGHLGGFLGGAA+ ++IGPR  RRLNP+TG+ Y+V+E  +   P L
Sbjct:   57 ITATNVLLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGMGSSQIDNMGHLGGFLGGAAMTFLIGPRFKRRLNPYTGQPYIVDESFKLGWPRL 262          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: A0A6H5JA75_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA75_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.960e-83
Identity = 132/206 (64.08%), Postives = 157/206 (76.21%), Query Frame = 0
Query:   56 LTMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRLSRRLNPFTGESYLVNEQRQFASPLL 261
            +T TN L  LN   YL QMR+P+IT AGWK+A AIT + QWYRLLTP+ LHGS  HL VNS S  +VGPVVE VMGKAKF+ +Y +AGI+GNVLSCIVNPR P+VGASGAIFGM+GAWGAF L N   +G   + RAL  V QTVMIN++ GM S QIDNMGHLGGFLGGAA+ ++IGPR   RLNP+TG+ Y+V+E  +   P L
Sbjct:  219 ITATNALLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTVAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGMGSSQIDNMGHLGGFLGGAAITFLIGPR---RLNPYTGQPYIVDESFKLGWPRL 421          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: A0A835Z1Q0_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q0_9STRA)

HSP 1 Score: 181 bits (459), Expect = 7.950e-53
Identity = 96/205 (46.83%), Postives = 130/205 (63.41%), Query Frame = 0
Query:   41 GGVGRRKRGRHQSPLLTMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRLSRRLNPFTG 245
            GG   R+R R   P  ++TNVL  +  A Y  Q   P IT  G K+ S I +R QWYRL+TP+FLH ++AHLL+NS SL  +GP VE   GK + L IY+L+G+SG + SC  NPR  +VGASGAIFGM+GA   F  +N   +G   ADR L  + +TV+IN ++G+   QIDN GH GGF+ G  + Y+ GP +    +P++G
Sbjct:    3 GGYATRRRPRSNMPKASVTNVLLAITAAIYGAQWLVPGITMQGAKITSKI-MRGQWYRLVTPIFLHANLAHLLMNSMSLYNIGPFVEQWFGKRRMLSIYVLSGVSGVLASCYWNPRASSVGASGAIFGMVGAAACFFASNRNELGA-GADRGLQSILRTVVINTIMGLQISQIDNAGHAGGFVAGFVLTYLFGPNMRWVGSPYSG 205          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: A0A7S2ENP6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENP6_9STRA)

HSP 1 Score: 174 bits (442), Expect = 5.840e-48
Identity = 91/180 (50.56%), Postives = 124/180 (68.89%), Query Frame = 0
Query:   57 TMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRL 236
            ++T  L + NVA Y +Q+ FPSIT  G K +  I  R++ YRL++PVFLHG V HL +NS+SL  +GP VE   G+ +FLG YL AG++GN+LS  ++P  P+VGASGAIFG++GA+  FL  N    G+ + +R LA + QT + NL+ G  S QIDN GH+GG LGGA +AY  GP+L
Sbjct:  197 SLTQRLVWTNVAIYGLQVVFPSITRWGAKRSDLILSRRELYRLISPVFLHGGVVHLAMNSFSLNNIGPEVERCFGQGRFLGTYLAAGVAGNLLSAYMSPN-PSVGASGAIFGLVGAYAVFLGRNKSLFGK-SGERGLASLRQTFVTNLIYGFMSPQIDNWGHIGGALGGATIAYHFGPKL 374          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: L1I841_GUITC (Rhomboid domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I841_GUITC)

HSP 1 Score: 160 bits (404), Expect = 3.110e-43
Identity = 95/213 (44.60%), Postives = 140/213 (65.73%), Query Frame = 0
Query:   58 MTNVLTFLNVATYLMQMRFP-SITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRM-PAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMS-SRQIDNMGHLGGFLGGAAVAYIIGPRLSRRLNPFTGESYLVNEQRQFASPLLRRLMGG 267
            +T+    +NV  +L+Q+    ++  AG K+ S I   +Q+YRLLTP+FLHGS++H+LVN +SL A+GP VE   G  + +  YLLAGI+GNV S    P++ P+VGASGAIFG++GA G FL  + +  G+  +   L G+ QT ++NL++G++    IDN GH+GG +GGA VAY+IGP L  + +  TG+  LV+E    + P  R+LM G
Sbjct:  144 VTDFFLIVNVVVFLLQLLTQGALLEAGAKITSMIVYERQYYRLLTPIFLHGSLSHILVNCFSLNAIGPQVERYFGTERTVITYLLAGIAGNVASFYFGPKLIPSVGASGAIFGLVGALGVFLARHQDIFGD-RSRYMLNGIIQTCILNLIIGLAPGSNIDNWGHIGGAIGGAVVAYLIGPNLKVKRS-LTGQ-VLVDEPL-VSLPGSRQLMYG 352          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: B8BT98_THAPS (Rhomboid domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT98_THAPS)

HSP 1 Score: 164 bits (415), Expect = 3.560e-42
Identity = 81/180 (45.00%), Postives = 123/180 (68.33%), Query Frame = 0
Query:   57 TMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRL 236
            T+T  +  LN+A + MQ  +P++T  G K +  +   +Q +RL+TP+FLHG + HL+ NSYSL+++G  +E   G+++F+  YLL+GI GNV+S I +P  PAVGASGAIFG++GA+  FL  N +  G  +  R  + + +T+  NL+LGM++  IDN GH+GGF+GG   AY+ GP+L
Sbjct:  533 TLTGNIFLLNIAVFGMQTLYPALTGWGAKRSDLLLEGRQLHRLITPIFLHGGIGHLMANSYSLKSMGMNIERSFGRSRFVATYLLSGIMGNVVSAIQSPN-PAVGASGAIFGLVGAYYTFLSRNQDLFGY-SGQRQKSALIETIGFNLLLGMTNPMIDNWGHIGGFIGGVGCAYLFGPKL 710          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: K0RTX6_THAOC (Rhomboid domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RTX6_THAOC)

HSP 1 Score: 160 bits (404), Expect = 8.460e-42
Identity = 83/181 (45.86%), Postives = 124/181 (68.51%), Query Frame = 0
Query:   57 TMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAG-VGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRL 236
            T+   +  +N+A Y +Q   P +T+ G K +  +   +Q +RL+TPVFLHG + HL+ NSYSL+++G  VEG  G A+ L  YL++G++GN+ S + +P  PAVGASGAIFG++GA+  FL  N E  G   + RA  G + +T+ INL+LGM++  IDN GHLGGF+GG  ++++IGP+L
Sbjct:  206 TLIGKIFLVNIAVYGLQTLMPQLTAWGAKRSDLLLEGRQLHRLITPVFLHGGIGHLVSNSYSLKSMGNNVEGAFGPARTLATYLVSGVAGNIFSAVNSPN-PAVGASGAIFGLVGAYYTFLARNSEIFGH--SGRAQKGALLETIGINLVLGMTNPVIDNWGHLGGFIGGVGMSWLIGPKL 383          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: R7Q8K5_CHOCR (Rhomboid domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8K5_CHOCR)

HSP 1 Score: 152 bits (383), Expect = 5.370e-40
Identity = 85/184 (46.20%), Postives = 125/184 (67.93%), Query Frame = 0
Query:   56 LTMTNVLTFLNVATYLMQ-MRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMS-SRQIDNMGHLGGFLGGAAVAYIIGPRLS 237
            + +++VL  LNV  + +Q +  P++   G K+ SAIT   Q+YRL +P+FLH SV+HLLVNS+SL + GP VE   GK +FL +Y+ +G+SGNVLS   +P  PAVGASGAIFG++GA    L  + + +G   A + L  +   V++N  +G++   ++DN GHLGGFLGG A +Y++GPRL+
Sbjct:  150 IRISHVLLALNVGVFALQTLMGPNVLMRGAKVNSAITAG-QYYRLFSPMFLHASVSHLLVNSFSLHSTGPSVESWFGKPRFLSLYIASGVSGNVLSYFCSPT-PAVGASGAIFGLVGASLVVLGRHRQILGP-RARKGLRSLAYVVIMNFGIGLTPGSRVDNFGHLGGFLGGIAFSYLLGPRLT 330          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: A0A7S2KLL1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLL1_9STRA)

HSP 1 Score: 152 bits (383), Expect = 5.730e-40
Identity = 85/212 (40.09%), Postives = 132/212 (62.26%), Query Frame = 0
Query:   42 GVGRRKRGRHQSPLL--TMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRLSRRLNPFTGESYLVN 251
            GV  R + + Q+     ++T  +   NVA + +Q+  P++T  G  + + I  R Q  R LTP+FLHG+++HL VNSYSL   GP +E ++G   F+  YL++G +GN ++   + + P+VGAS AI G++GA+G F+  N +  G  + D+AL  +  T ++N++LG++S  IDN GHLGG LGG A +Y++GPRL +   P    S LVN
Sbjct:  102 GVSPRSKAQQQAQRRGSSITAKIVAANVAMFFVQVLSPAVTKWGANVPALI--RYQPRRFLTPLFLHGTLSHLAVNSYSLLNTGPAMERILGSKLFIATYLISGAAGNAMTATFS-KYPSVGASSAICGLVGAYGVFIKRNQDFFGA-SGDQALRQIQTTTILNVVLGLASPMIDNWGHLGGTLGGMAASYVLGPRLHKMDLPSGNGSMLVN 309          
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Match: E1Z519_CHLVA (Rhomboid domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z519_CHLVA)

HSP 1 Score: 146 bits (369), Expect = 3.340e-39
Identity = 83/204 (40.69%), Postives = 125/204 (61.27%), Query Frame = 0
Query:   49 GRHQSPLLTMTNVLTF-LNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLLTPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLSCIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTVMINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRLSRRLNPFTGESYLVN 251
            GR  + +L ++N L F L + T        ++T  G K+ +A+ V  QW+RLLTP FLHG++ HL VN YSL  +GP VEG  G  +FL +YL A ++GNV S +  P+  ++GASGA+FG+ GA   +   N +  G+ + DR L  + QT+++N++ G+SS +IDN GH+GG +GGA    ++GPR      P     +LV+
Sbjct:   35 GRRATDVLLVSNALLFGLQLLTK------QALTVWGVKV-NALVVAGQWWRLLTPAFLHGNLMHLAVNCYSLNNLGPPVEGAAGPPRFLLMYLSAAVAGNVASFLGAPKSVSLGASGAVFGIGGALAMYFYRNRDIYGKTS-DRVLRQLWQTLVLNVVYGLSSTRIDNWGHMGGLVGGALAGLLLGPRFQATTLPGKRGKWLVD 230          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig925.1.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK43_ECTSI3.400e-8965.53Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JA75_9PHAE1.960e-8364.08Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A835Z1Q0_9STRA7.950e-5346.83Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2ENP6_9STRA5.840e-4850.56Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
L1I841_GUITC3.110e-4344.60Rhomboid domain-containing protein n=1 Tax=Guillar... [more]
B8BT98_THAPS3.560e-4245.00Rhomboid domain-containing protein n=1 Tax=Thalass... [more]
K0RTX6_THAOC8.460e-4245.86Rhomboid domain-containing protein n=2 Tax=Thalass... [more]
R7Q8K5_CHOCR5.370e-4046.20Rhomboid domain-containing protein n=1 Tax=Chondru... [more]
A0A7S2KLL1_9STRA5.730e-4040.09Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
E1Z519_CHLVA3.340e-3940.69Rhomboid domain-containing protein n=1 Tax=Chlorel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 93..235
e-value: 1.7E-36
score: 125.5
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 53..236
e-value: 2.8E-37
score: 130.2
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 55..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..50
NoneNo IPR availablePANTHERPTHR43731RHOMBOID PROTEASEcoord: 53..252
NoneNo IPR availablePANTHERPTHR43731:SF14PRESENILINS-ASSOCIATED RHOMBOID-LIKE PROTEIN, MITOCHONDRIALcoord: 53..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig925contigC-tenellus_contig925:561..4636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig925.1.5mRNA_C-tenellus_contig925.1.5Choristocarpus tenellus KU2346mRNAC-tenellus_contig925 66..6006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig925.1.5 ID=prot_C-tenellus_contig925.1.5|Name=mRNA_C-tenellus_contig925.1.5|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=284bp
MMSEQQKGITAHGQRGVISQYSRGYSRGGGYSRGRGHSQHGGVGRRKRGR
HQSPLLTMTNVLTFLNVATYLMQMRFPSITSAGWKLASAITVRKQWYRLL
TPVFLHGSVAHLLVNSYSLRAVGPVVEGVMGKAKFLGIYLLAGISGNVLS
CIVNPRMPAVGASGAIFGMIGAWGAFLLTNYEAVGEVAADRALAGVGQTV
MINLMLGMSSRQIDNMGHLGGFLGGAAVAYIIGPRLSRRLNPFTGESYLV
NEQRQFASPLLRRLMGGDRSSWQQPYQQEKRWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf