prot_C-tenellus_contig9242.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9242.2.1
Unique Nameprot_C-tenellus_contig9242.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length207
Homology
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BLAST of mRNA_C-tenellus_contig9242.2.1 vs. uniprot
Match: A0A6H5KXK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK4_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.050e-7
Identity = 22/41 (53.66%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:   64 SAPVSQATHFYREGKYSNCTEEWGDFKTCMTAKFLSDEEEA 104
            + PVSQATH+YREG+Y++C++ W DFKT + AK  ++E++A
Sbjct:   21 TTPVSQATHYYREGRYTSCSDCWKDFKTSIAAKMCNEEQDA 61
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9242.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXK4_9PHAE1.050e-753.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021475Protein of unknown function DUF3128PFAMPF11326DUF3128coord: 64..105
e-value: 1.0E-8
score: 35.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9242contigC-tenellus_contig9242:2842..3781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9242.2.1mRNA_C-tenellus_contig9242.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9242 2082..3800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9242.2.1 ID=prot_C-tenellus_contig9242.2.1|Name=mRNA_C-tenellus_contig9242.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=207bp
MPQPNSVVNCWYNLDFFFSCLCEVQCWCSSHSLPSAMLSHLETHGNISRL
TFQCLFAMNHAAPSAPVSQATHFYREGKYSNCTEEWGDFKTCMTAKFLSD
EEEAKRATCHPSSSLGSTPTPLPWSPLICLYIPHLLPCISSSRGCGNSFH
RQKLPRFRIVRGREKPIRHWLSGISKTRHVSAMTMVIHLIPAKLGRAGAR
EDLAVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021475DUF3128