prot_C-tenellus_contig9198.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9198.1.1
Unique Nameprot_C-tenellus_contig9198.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length60
Homology
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A7J6TR44_PEROL (RING-type domain-containing protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6TR44_PEROL)

HSP 1 Score: 67.4 bits (163), Expect = 1.200e-11
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    4 DETLCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLRDCPLCRAVIDERLNIF 58
            DE+LC VCQ   R+VVL+PCRH+C+C+ C++  G+E    CPLCR  I ERL +F
Sbjct:  463 DESLCVVCQTELRTVVLMPCRHMCVCTRCSERLGSE----CPLCRDHIKERLKVF 513          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A7J6L9U4_PERCH (ATP-dependent RNA helicase dhx8 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6L9U4_PERCH)

HSP 1 Score: 67.4 bits (163), Expect = 1.200e-11
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    4 DETLCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLRDCPLCRAVIDERLNIF 58
            DE+LC VCQ   R+VVL+PCRH+C+C+ C++  G+E    CPLCR  I ERL +F
Sbjct:  466 DESLCVVCQSELRTVVLMPCRHMCVCTGCSERLGSE----CPLCRDHIKERLKVF 516          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A7J6QNH5_PEROL (Importin alpha subunit (Karyopherin alpha subunit) (Serine-rich RNA polymerase I suppressor protein) (Fragment) n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QNH5_PEROL)

HSP 1 Score: 67.4 bits (163), Expect = 1.220e-11
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    4 DETLCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLRDCPLCRAVIDERLNIF 58
            DE+LC VCQ   R+VVL+PCRH+C+C+ C++  G+E    CPLCR  I ERL +F
Sbjct:  836 DESLCVVCQTELRTVVLMPCRHMCVCTRCSERLGSE----CPLCRDHIKERLKVF 886          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: UPI00085417B8 (RING finger protein 26 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI00085417B8)

HSP 1 Score: 67.0 bits (162), Expect = 1.620e-11
Identity = 27/53 (50.94%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    8 CCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPL--RDCPLCRAVIDERLNIF 58
            C +CQD+P+S++LLPCRHLCLC+ C +    +P+  R+CPLCR +I + LN++
Sbjct:  388 CVICQDQPKSILLLPCRHLCLCARCTNILQQQPILQRNCPLCRQMILQTLNVY 440          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A1B0G6K1_GLOMM (RING-type domain-containing protein n=1 Tax=Glossina morsitans morsitans TaxID=37546 RepID=A0A1B0G6K1_GLOMM)

HSP 1 Score: 65.9 bits (159), Expect = 2.970e-11
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    5 ETLCCVCQDRPRSVVLLPCRHLCLCSTCADEA-GAEPLRDCPLCRAVIDERLNIF 58
            E  C VCQDR +SVVLLPCRHLCLC  CA+     +  R+CPLCRA I + L+++
Sbjct:  243 ENCCVVCQDRVKSVVLLPCRHLCLCKDCANYLLFIDQQRNCPLCRAFITDSLSVY 297          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A7J6RPE2_PEROL (RING-type domain-containing protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RPE2_PEROL)

HSP 1 Score: 66.2 bits (160), Expect = 2.970e-11
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    4 DETLCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLRDCPLCRAVIDERLNIF 58
            D++LC VCQ   R+VVL+PCRH+C+C+ C++  G+E    CPLCR  I ERL +F
Sbjct:  354 DDSLCVVCQTELRTVVLMPCRHMCVCTRCSERLGSE----CPLCRDHIKERLKVF 404          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A7S0ATP2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATP2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.920e-11
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    4 DETLCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLRDCPLCRAVIDERLNIF 58
            +E LC +C++  + VVLLPC+HLCLCS C+     E + DCP+CR  I +++ +F
Sbjct:   72 EENLCIICEEATKRVVLLPCKHLCLCSVCSK---LEQITDCPMCRTKISDKMEVF 123          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: H9KV16_MOUSE (E3 ubiquitin-protein ligase RNF26 (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=H9KV16_MOUSE)

HSP 1 Score: 60.8 bits (146), Expect = 5.330e-11
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    8 CCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPL--RDCPLCRAVIDERLNIF 58
            C +CQD+ ++V+LLPCRHLCLC  C +     P+  R+CPLCR  I + LN++
Sbjct:   11 CVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNVY 63          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A812S5N9_SYMMI (Rnf26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S5N9_SYMMI)

HSP 1 Score: 64.7 bits (156), Expect = 5.490e-11
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    4 DET---LCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLRDCPLCRAVIDERLNIF 58
            DET   LCCVC+D  ++V+LLPC+HLCLC  C++      +  CP+CR  + + L ++
Sbjct:  193 DETENALCCVCRDNNKTVLLLPCKHLCLCEVCSEHISTRRMTSCPVCRQAVSDALRVY 250          
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Match: A0A7S3HRK6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRK6_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.290e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    4 DETLCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLR--------------DCPLCRAVIDERL 55
            D+ LCC+C + P+SV+L+PCRHLC+C  C++     PLR               CP+CRA +DE L
Sbjct:  201 DQNLCCICLEHPKSVLLMPCRHLCVCQVCSEGGPESPLRASRPRQEKRVKSIKSCPVCRAAVDECL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9198.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J6TR44_PEROL1.200e-1154.55RING-type domain-containing protein n=5 Tax=Perkin... [more]
A0A7J6L9U4_PERCH1.200e-1154.55ATP-dependent RNA helicase dhx8 n=1 Tax=Perkinsus ... [more]
A0A7J6QNH5_PEROL1.220e-1154.55Importin alpha subunit (Karyopherin alpha subunit)... [more]
UPI00085417B81.620e-1150.94RING finger protein 26 n=1 Tax=Nanorana parkeri Ta... [more]
A0A1B0G6K1_GLOMM2.970e-1156.36RING-type domain-containing protein n=1 Tax=Glossi... [more]
A0A7J6RPE2_PEROL2.970e-1152.73RING-type domain-containing protein n=2 Tax=Perkin... [more]
A0A7S0ATP2_9STRA3.920e-1145.45Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
H9KV16_MOUSE5.330e-1149.06E3 ubiquitin-protein ligase RNF26 (Fragment) n=1 T... [more]
A0A812S5N9_SYMMI5.490e-1143.10Rnf26 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3HRK6_9STRA6.290e-1142.42Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 8..47
e-value: 0.0014
score: 27.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 8..48
score: 10.601
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 5..53
e-value: 1.5E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR22696E3 UBIQUITIN-PROTEIN LIGASE RNF26coord: 6..58
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 4..55
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..59
e-value: 3.4E-17
score: 63.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9198contigC-tenellus_contig9198:3053..3232 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9198.1.1mRNA_C-tenellus_contig9198.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9198 3053..3232 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9198.1.1 ID=prot_C-tenellus_contig9198.1.1|Name=mRNA_C-tenellus_contig9198.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=60bp
AHPDETLCCVCQDRPRSVVLLPCRHLCLCSTCADEAGAEPLRDCPLCRAV
IDERLNIFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD