prot_C-tenellus_contig9183.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9183.1.1
Unique Nameprot_C-tenellus_contig9183.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length309
Homology
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BLAST of mRNA_C-tenellus_contig9183.1.1 vs. uniprot
Match: A0A6H5JKB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB5_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.950e-49
Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0 
Query:  114 KVDTIVLAKCRRKSQTMWPARVCSRREVLERLKEAPASDDGVDPRNECLVMFLCEGGHHVMDWVSPGVMRPYQSHASAYPYKKRAYVGTARLQPDFAAAEAWADGLKSIVKSIRAEVRAARR 235
            ++DTIVLAKCRRKSQTMWPAR+CS+RE+LER++    +D+GVDPR+ CLV+FLCEGGHHV DWV+PG MRPY  HA+AYPYKK+AY GTARLQPDF AAEAW + +K++V + RAE R  RR
Sbjct:  594 RIDTIVLAKCRRKSQTMWPARLCSKREMLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQPDFTAAEAWGEEMKALVTARRAEARTLRR 715
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BLAST of mRNA_C-tenellus_contig9183.1.1 vs. uniprot
Match: D7G062_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G062_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 2.520e-26
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:  141 VLERLKEAPASDDGVDPRNECLVMFLCEGGHHVMDWVSPGVMRPYQSHASAYPYKKRAYVGTARLQ 206
            +LER++    +D+GVDPR+ CLV+FLCEGGHHV DWV+PG MRPY  HA+AYPYKK+AY GTARLQ
Sbjct:    1 MLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQ 66
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9183.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKB5_9PHAE1.950e-4969.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G062_ECTSI2.520e-2669.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainPFAMPF00855PWWPcoord: 114..197
e-value: 1.3E-8
score: 35.2
NoneNo IPR availableGENE3D2.30.30.140coord: 107..240
e-value: 4.6E-8
score: 35.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..68
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 109..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9183contigC-tenellus_contig9183:184..4176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9183.1.1mRNA_C-tenellus_contig9183.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9183 184..4176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9183.1.1 ID=prot_C-tenellus_contig9183.1.1|Name=mRNA_C-tenellus_contig9183.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=309bp
EGEGEEEEDAGEKGAIATRLGGRTRKASAKYQEFKQVQRKSVRQSGEPLH
SRGPSRLSNRATSGLSGVGRSAVQRSIVKRSVGNGAVALSGAGAGAGASA
LVQRGVAGEPWEVKVDTIVLAKCRRKSQTMWPARVCSRREVLERLKEAPA
SDDGVDPRNECLVMFLCEGGHHVMDWVSPGVMRPYQSHASAYPYKKRAYV
GTARLQPDFAAAEAWADGLKSIVKSIRAEVRAARRLAKANAASGPEKEAL
LLKAAENQDGAITPAPLAVKEEKEGTALVVAGERSGAGDCDIAMAVTGKK
EDVEGGVAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom