prot_C-tenellus_contig8087.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8087.4.1
Unique Nameprot_C-tenellus_contig8087.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length51
Homology
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: A0A6H5JPL0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL0_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.350e-15
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:   11 AVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKNT 51
            AVVHKTGC CRKSACLKKYCECFN+GV CS+ C+C +C+NT
Sbjct:  447 AVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVACRNT 487          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: D8LP28_ECTSI (TSO1 transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP28_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 4.580e-15
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0
Query:   11 AVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKNT 51
            AVVHKTGC CRKSACLKKYCECFN+GV CS+ C+C  C+NT
Sbjct:   93 AVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVGCRNT 133          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: G0QLW2_ICHMG (CRC domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QLW2_ICHMG)

HSP 1 Score: 71.2 bits (173), Expect = 6.380e-15
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0
Query:   10 KAVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKN 50
            K V+HK GC C+KS CLKKYCECFN GV C+QNC C SCKN
Sbjct:   28 KIVIHKKGCTCKKSNCLKKYCECFNAGVLCNQNCVCDSCKN 68          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: A0A6H5K1G5_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G5_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.080e-14
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0
Query:   11 AVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKNT 51
            A+VH TGCGC KSACLK+YCECFN G+ CS  C C+ CKNT
Sbjct:   69 ALVHNTGCGCSKSACLKRYCECFNGGIACSNKCRCKDCKNT 109          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: A0A7S1C0F8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0F8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.060e-14
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    8 SSKAVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKN 50
            S+K   HK GC CRKSACLKKYCECFN GV+CSQNC C +C+N
Sbjct:  368 STKTGAHKVGCKCRKSACLKKYCECFNMGVKCSQNCRCINCQN 410          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: UPI0019D4FBBA (CRC domain-containing protein TSO1-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D4FBBA)

HSP 1 Score: 68.9 bits (167), Expect = 2.350e-12
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    3 DLSGSSSKAVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKNT 51
            D S ++  +  HK GC CRKS+CLKKYCECF  GV CS NC C SCKN+
Sbjct:  531 DDSNNTPASARHKRGCNCRKSSCLKKYCECFQSGVGCSVNCRCASCKNS 579          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: A0A368SHC1_SETIT (CRC domain-containing protein n=2 Tax=Setaria italica TaxID=4555 RepID=A0A368SHC1_SETIT)

HSP 1 Score: 68.6 bits (166), Expect = 3.210e-12
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    3 DLSGSSSKAVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKNT 51
            D S ++  +  HK GC CRKS+CLKKYCECF  GV CS +C C SCKN+
Sbjct:  302 DNSNNTPASARHKRGCNCRKSSCLKKYCECFQSGVGCSMSCRCESCKNS 350          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: A0A7S2JSJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSJ0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.390e-12
Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    7 SSSKAVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKN 50
            S  + V HK GC CRKSACLKKYCEC+N GV+CS NC C +C N
Sbjct:   58 SDGEQVEHKFGCKCRKSACLKKYCECYNAGVKCSGNCRCFNCHN 101          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: A0A3L6SFF9_PANMI (CRC domain-containing protein n=5 Tax=Panicum TaxID=4539 RepID=A0A3L6SFF9_PANMI)

HSP 1 Score: 68.2 bits (165), Expect = 4.390e-12
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    3 DLSGSSSKAVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKNT 51
            D S ++  +  HK GC CRKS+CLKKYCECF  GV CS +C C SCKN+
Sbjct:  507 DDSNNTPASTRHKRGCNCRKSSCLKKYCECFQSGVGCSMSCRCESCKNS 555          
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Match: A0A835B1W7_9POAL (CRC domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835B1W7_9POAL)

HSP 1 Score: 67.8 bits (164), Expect = 5.970e-12
Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    2 SDLSGSSSKA---VVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKNT 51
            SD    S+K    V HK GC CRKS+CLKKYCECF  GV CS +C C+SCKN+
Sbjct:  251 SDFGDDSNKTPALVRHKRGCNCRKSSCLKKYCECFQSGVGCSISCRCQSCKNS 303          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8087.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPL0_9PHAE3.350e-1578.05CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LP28_ECTSI4.580e-1578.05TSO1 transcription factor (Partial) (Fragment) n=1... [more]
G0QLW2_ICHMG6.380e-1573.17CRC domain-containing protein n=1 Tax=Ichthyophthi... [more]
A0A6H5K1G5_9PHAE2.080e-1470.73CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S1C0F8_9STRA4.060e-1472.09Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
UPI0019D4FBBA2.350e-1261.22CRC domain-containing protein TSO1-like n=1 Tax=Pa... [more]
A0A368SHC1_SETIT3.210e-1259.18CRC domain-containing protein n=2 Tax=Setaria ital... [more]
A0A7S2JSJ0_9STRA3.390e-1265.91Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A3L6SFF9_PANMI4.390e-1259.18CRC domain-containing protein n=5 Tax=Panicum TaxI... [more]
A0A835B1W7_9POAL5.970e-1260.38CRC domain-containing protein n=1 Tax=Digitaria ex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 13..51
e-value: 1.3E-5
score: 34.7
IPR005172CRC domainPFAMPF03638TCRcoord: 16..51
e-value: 1.1E-12
score: 48.1
IPR005172CRC domainPROSITEPS51634CRCcoord: 1..51
score: 17.109
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 9..51
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 9..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8087contigC-tenellus_contig8087:5633..5785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8087.4.1mRNA_C-tenellus_contig8087.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8087 5633..5785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8087.4.1 ID=prot_C-tenellus_contig8087.4.1|Name=mRNA_C-tenellus_contig8087.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=51bp
ESDLSGSSSKAVVHKTGCGCRKSACLKKYCECFNQGVRCSQNCHCRSCKN
T
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam