prot_C-tenellus_contig8087.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8087.1.1
Unique Nameprot_C-tenellus_contig8087.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length57
Homology
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BLAST of mRNA_C-tenellus_contig8087.1.1 vs. uniprot
Match: A0A7S3ZVE2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVE2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.630e-8
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 0 
Query:    2 CLLRYCQCFAGQAPCSTACNCLNCHNTLAHSRERQRAMTGLLVRNPNAFATKFK 55
            CL  YC CFA    C   CNC++CHN LAH++ER  A+   L +NP AF  K K
Sbjct:  399 CLKLYCDCFAAGRWCK-GCNCVDCHNDLAHAKERDEAIRATLEKNPKAFRAKVK 451
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BLAST of mRNA_C-tenellus_contig8087.1.1 vs. uniprot
Match: A0A6G1SKJ5_9ACAR (Protein lin-54 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SKJ5_9ACAR)

HSP 1 Score: 53.5 bits (127), Expect = 8.140e-7
Identity = 27/53 (50.94%), Postives = 32/53 (60.38%), Query Frame = 0 
Query:    2 CLLRYCQCFAGQAPCSTACNCLNCHNTLAHSRERQRAMTGLLVRNPNAFATKF 54
            CL  YC CFA    CS  CNC NC N+L   +ERQ+A++  L RNP AF  K 
Sbjct:  177 CLKLYCDCFANGEFCS-GCNCTNCSNSLDKEKERQKAISQCLERNPEAFRPKI 228
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BLAST of mRNA_C-tenellus_contig8087.1.1 vs. uniprot
Match: A0A1R2B5P7_9CILI (CRC domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B5P7_9CILI)

HSP 1 Score: 47.0 bits (110), Expect = 8.060e-5
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 0 
Query:    2 CLLRYCQCFAGQAPCSTACNCLNCHNTLAHSRERQRAMTGLLVRNPNAFAT-KFKTE 57
            CL  YC+CF+    C   CNC+NC N   +   R +A+T LL RN  AFAT K KT+
Sbjct:   61 CLKLYCECFSKGRYC-IGCNCINCFNVPEYESIRNKAVTHLLHRNSEAFATEKNKTK 116
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8087.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S3ZVE2_9STRA2.630e-850.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6G1SKJ5_9ACAR8.140e-750.94Protein lin-54 n=1 Tax=Aceria tosichella TaxID=561... [more]
A0A1R2B5P7_9CILI8.060e-547.37CRC domain-containing protein n=1 Tax=Stentor coer... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 1..31
e-value: 5.1E-4
score: 24.3
IPR005172CRC domainPFAMPF03638TCRcoord: 2..28
e-value: 1.1E-7
score: 32.0
IPR005172CRC domainPROSITEPS51634CRCcoord: 1..57
score: 12.939
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 2..56
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8087contigC-tenellus_contig8087:4348..4518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8087.1.1mRNA_C-tenellus_contig8087.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8087 4348..4518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8087.1.1 ID=prot_C-tenellus_contig8087.1.1|Name=mRNA_C-tenellus_contig8087.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=57bp
MCLLRYCQCFAGQAPCSTACNCLNCHNTLAHSRERQRAMTGLLVRNPNAF
ATKFKTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam