prot_C-tenellus_contig8040.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8040.2.1
Unique Nameprot_C-tenellus_contig8040.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length110
Homology
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: D7FQZ2_ECTSI (Signal peptidase complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ2_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.710e-28
Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 0
Query:   40 LQAIGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRKGVKPVGAAAD 104
            L A+GWVVGF+ GDF  T+ GW AG+ +S++LVVPDWP FN++PTKWLD LPPR+GV PVGAAA+
Sbjct:   20 LGAVGWVVGFVMGDFMYTLAGWGAGMALSMILVVPDWPMFNRNPTKWLDRLPPREGVMPVGAAAE 84          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: A0A7R9UF33_9STRA (Signal peptidase complex subunit 1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF33_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.420e-17
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   43 IGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRKGVKPV 99
            I W++GF   DF+ TV+GW  G+ ++ LL VPDWPWFN+HP +WLD +P   G +P 
Sbjct:   23 IAWIIGFFQADFQTTVIGWGIGLALATLLCVPDWPWFNRHPIRWLDHIP---GAEPA 76          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: A0A7S1TSQ8_9STRA (Signal peptidase complex subunit 1 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSQ8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.350e-16
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 0
Query:   42 AIGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRKGVKPVG 100
            AI W++GF   DF++TV+GW  GV ++ LL VPDWPWFN++P +WL+ +P   G +PVG
Sbjct:   41 AIAWMIGFFKEDFQVTVIGWGIGVLLATLLCVPDWPWFNRNPIRWLEHIP---GAEPVG 96          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: B7G343_PHATC (Signal peptidase complex subunit 1 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G343_PHATC)

HSP 1 Score: 75.5 bits (184), Expect = 8.270e-16
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   39 ALQAIGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRK 94
            A  A+GW++GF   DF +    W  GV ISI+L VPDWP++N+HP +WL+S+P R+
Sbjct:   19 AFGAVGWIIGFFQQDFLIVFQAWLVGVVISIILCVPDWPFYNRHPIQWLESVPDRR 74          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: A0A1Z5KKY6_FISSO (Signal peptidase complex subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKY6_FISSO)

HSP 1 Score: 74.3 bits (181), Expect = 2.480e-15
Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   43 IGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRK 94
            IGWV+G+   DF +    W AGV +S++L VPDWP++N+HP KWL+S+P R+
Sbjct:   23 IGWVIGYFQEDFTVVFQAWLAGVVLSVILCVPDWPFYNRHPIKWLESVPDRR 74          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: A0A6U3TG41_9STRA (Signal peptidase complex subunit 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3TG41_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.120e-15
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   39 ALQAIGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSL 90
            A  A GW+ G++  DFK T+  W  GV IS++L VPDWPWFN++P +W DS+
Sbjct:   19 AFGAFGWIWGYVEKDFKFTMYSWGVGVAISVVLCVPDWPWFNRNPVEWRDSI 70          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: A0A1E7F4F8_9STRA (Signal peptidase complex subunit 1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4F8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.540e-15
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   40 LQAIGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRKGVKPVG 100
            L  +GWV+G+   +F +    W  GV IS +L VPDWP +N+HP KWLDS+P RK V   G
Sbjct:   20 LGGVGWVIGYFRQEFFIVFKFWLVGVVISAVLCVPDWPMYNKHPIKWLDSVPDRKSVSSSG 80          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: A0A7R9W954_9STRA (Signal peptidase complex subunit 1 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W954_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.140e-14
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   42 AIGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRK 94
            A+GWV+G++  DF      W  GV +S +L VPDWP++N+HP KWL+S+P R+
Sbjct:   49 AVGWVIGYVKQDFTYVFYSWGIGVILSCILCVPDWPFYNRHPVKWLESVPERR 101          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: A0A448YY69_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY69_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 9.720e-14
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   43 IGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRKG 95
            +GWV+G+   +F +    W  GV +S +L VPDWP++N+HP KWLDS+P R+G
Sbjct:   23 VGWVIGYFRQEFFIVFKFWLVGVVLSTVLCVPDWPFYNRHPIKWLDSVPDRRG 75          
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Match: B8C1V5_THAPS (Signal peptidase complex subunit 1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V5_THAPS)

HSP 1 Score: 67.8 bits (164), Expect = 9.530e-13
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0
Query:   42 AIGWVVGFIYGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSL 90
            +IGW+ G+   DF      W  GV IS++L VPDWP FN+HP KWL+S+
Sbjct:   22 SIGWIYGYFLQDFTYVFYSWCVGVAISVVLCVPDWPIFNKHPVKWLESV 70          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8040.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ2_ECTSI3.710e-2867.69Signal peptidase complex subunit 1 n=2 Tax=Ectocar... [more]
A0A7R9UF33_9STRA6.420e-1750.88Signal peptidase complex subunit 1 n=1 Tax=Pinguio... [more]
A0A7S1TSQ8_9STRA1.350e-1652.54Signal peptidase complex subunit 1 n=1 Tax=Phaeomo... [more]
B7G343_PHATC8.270e-1650.00Signal peptidase complex subunit 1 n=2 Tax=Phaeoda... [more]
A0A1Z5KKY6_FISSO2.480e-1551.92Signal peptidase complex subunit 1 n=2 Tax=Fistuli... [more]
A0A6U3TG41_9STRA3.120e-1551.92Signal peptidase complex subunit 1 n=1 Tax=Dictyoc... [more]
A0A1E7F4F8_9STRA5.540e-1549.18Signal peptidase complex subunit 1 n=1 Tax=Fragila... [more]
A0A7R9W954_9STRA4.140e-1449.06Signal peptidase complex subunit 1 n=1 Tax=Pseudic... [more]
A0A448YY69_9STRA9.720e-1449.06Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B8C1V5_THAPS9.530e-1351.02Signal peptidase complex subunit 1 n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009542Signal peptidase complex subunit Spc1/SPCS1PFAMPF06645SPC12coord: 41..89
e-value: 1.6E-15
score: 56.9
IPR009542Signal peptidase complex subunit Spc1/SPCS1PANTHERPTHR13202MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNITcoord: 41..89
IPR037713Signal peptidase complex subunit Spc1PANTHERPTHR13202:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 1coord: 41..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8040contigC-tenellus_contig8040:2568..3655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8040.2.1mRNA_C-tenellus_contig8040.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8040 2568..5687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8040.2.1 ID=prot_C-tenellus_contig8040.2.1|Name=mRNA_C-tenellus_contig8040.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=110bp
MSRIVNLTLHKHYVFLPFLFSNSSHLPPPGLTHSSPDFALQAIGWVVGFI
YGDFKLTVMGWAAGVGISILLVVPDWPWFNQHPTKWLDSLPPRKGVKPVG
AAADAVKQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009542Spc1/SPCS1
IPR037713Spc1