prot_C-tenellus_contig7977.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7977.2.1
Unique Nameprot_C-tenellus_contig7977.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length249
Homology
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: D7G2N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N9_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.330e-18
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 0
Query:  110 LLTLALRLATHEGKIVADQRG-------QFLCKLPLLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPILSRGKYVLLRVCNGLVSRLSKTHDASFCGQV 204
            +L+LAL    +E  +     G       Q L  LPLLLLED+++SQG  +CKE W  WVE NS  L+    L+ G+Y L+R+CN L  R+SKTHD+S CGQ+
Sbjct:  141 ILSLALAFVANEAGLDKSDGGGDSWSINQVLTALPLLLLEDFMESQGRTACKEFWSAWVEPNSERLSRLVPLNNGRYPLIRLCNKLAQRMSKTHDSSLCGQM 242          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A7S2W205_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W205_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 9.300e-11
Identity = 53/146 (36.30%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   77 AQEVEVAFRTRMHDLVTKMNKEELSLEISGVPNLLTLALRLATHEGKIVADQRGQFLC-------KLPLLLLEDYLDSQGTE----------SCKEMWGTWVEGNSAELTAEPILS-RGKYVLLRVCNGLVSRLSKTHDASFCGQV 204
            A E+E  FR+++ +++             GV  LL +++  A  EGK  A + G  L        KLP LL ED +++   E          S + +W T +E     LT  P L  +GK VLLR+CNGLV RLSKTHD  +CG+V
Sbjct:   58 ASELEFIFRSKLAEIIKTHG--------DGVERLLRVSVDYAMMEGK-AASEAGATLASALPTTGKLPFLLFEDLMETSVLETSQDDPATSWSARRVW-TLLEEYREPLTETPALFLKGKLVLLRLCNGLVRRLSKTHDTEWCGRV 193          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A067CNZ3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNZ3_SAPPC)

HSP 1 Score: 68.9 bits (167), Expect = 9.540e-10
Identity = 41/113 (36.28%), Postives = 58/113 (51.33%), Query Frame = 0
Query:   97 KEELSLEISGVPNLLTLALRLATHEGKIVADQRGQFLCKLPLLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPILSRGK-----YVLLRVCNGLVSRLSKTHDASFCGQV 204
            K + +LE  G+P LL L    AT         RG  +   P  +LED +D Q    C+++WG  +E   + LT    +  GK       LLR+CN L+ RLSKTH+  FCG++
Sbjct:   76 KRDATLESVGIPALLDLCTDGAT---------RGYLMLNAPYKILEDLVDCQTIVVCEQLWGL-LESRRSRLTTTDFIQAGKNSKASLCLLRMCNALLRRLSKTHNTVFCGRI 178          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A7S3MH41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MH41_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.000e-9
Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 0
Query:   79 EVEVAFRTRMHDLVTKMNKEELSLEISGVPNLLTLALRLATHEGKIVADQRGQFLCKLPLLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPILSRGKYVLLRVCNGLVSRLSKTHDASFCGQV 204
            ++E++ R  + D + K +  E+  E S V  LL  A R A H   I      Q + K+P  ++ED ++SQ  E  + +W   +E     +T   I  +GK  +LR CN L+ +LSK+ +  FCG+V
Sbjct:   46 DMEISIRGLLSDHL-KSSASEVISESSEVVKLLKFAFRFAVHFHDI------QNVAKVPFSMIEDIMESQTIEKAEALWQI-IESLVEVITQPDIFPKGKLTILRTCNSLLRKLSKSCNTEFCGRV 163          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A484EG24_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG24_BRELC)

HSP 1 Score: 63.5 bits (153), Expect = 6.430e-8
Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 0
Query:   80 VEVAFRTRMHDLVTKMNKEELSLEIS-GVPNLLTLALRLATHEGKIVADQRGQFLCKLPLLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEP--ILSRGKYV-----LLRVCNGLVSRLSKTHDASFCGQV 204
            +E+A +  +  L  K+  E  +   S GVP LL L +   T          G  +   P  +LED ++ Q   +C+++W   +E    +LTA+P  I  +G+       LLR+CN L+ RLSKTHD+ FCG++
Sbjct:   54 LEMAVQKVVEKLSWKLMTEARATASSVGVPALLDLCIAGVTS---------GYLINSTPYKVLEDLMEGQTISTCEKVWDL-LEARKVKLTAKPAFIAEKGRTTKASLCLLRMCNALLRRLSKTHDSVFCGKI 176          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A1V9ZSV5_9STRA (THO complex subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZSV5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.540e-7
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 0
Query:   97 KEELSLEISGVPNLLTLALRLATHEGKIVADQRGQFLCKLPLLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPILSRGK-----YVLLRVCNGLVSRLSKTHDASFCGQV 204
            K + ++E  G+P LL L +     EG     ++   +   P  +LED +D Q    C+++WG  +E     LT    +  GK       LLR+CN L+ RLSKTH+  FCG++
Sbjct:   72 KPKATIESVGIPTLLDLCI-----EGA----KKQYLMLNAPYKILEDLMDCQTIVVCEKLWGL-LESRRNSLTNSDFIQAGKTNKASLSLLRMCNALLRRLSKTHNTVFCGRI 174          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A2K1L077_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L077_PHYPA)

HSP 1 Score: 62.4 bits (150), Expect = 1.620e-7
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0
Query:  140 LLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPILSRGKYVLLRVCNGLVSRLSKTHDASFCGQV 204
            LLED  +    + CKE++G ++EG    L    + SRGK V+LR CN L+ RLSKT+D  FCG++
Sbjct:  123 LLEDLTEVSTIKDCKEVFG-YIEGKQETLGKSELFSRGKLVMLRTCNQLLRRLSKTNDVVFCGRI 186          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: T2M853_HYDVU (THO complex subunit 1 n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2M853_HYDVU)

HSP 1 Score: 62.0 bits (149), Expect = 2.070e-7
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 0
Query:   46 EPVTNAVAKGKGVDKDSRLKAQAVPLVAEGGAQEVEVAFRTRMHDLVTKMN---KEELSLEISGVPNLLTLALRLATHEGKIVADQRGQFLCK-LPLLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPILSRGKYVLLRVCNGLVSRLSKTHDASFCGQVK 205
            E ++   +K +GV+ D RL       V  G     ++ + +  H   +  N   ++E+   IS    LL            ++   + QF  K LP+LLL D  D+     C++M+  ++E N +   AEP  S GK  LLR+CN ++ RLSK+ +  FCG+++
Sbjct:   33 EAISKLFSKYEGVENDCRLATDQAFRVTLG-----KILYPSNNHLHHSDKNDISEKEMDKCISQYEELLDY----------VIIHAKEQFCTKNLPILLLSDIFDTMTLCDCEKMF-KYIEKNVSVWNAEPFFSTGKNHLLRMCNDMLRRLSKSQNTVFCGRIQ 180          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A024GB19_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024GB19_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.180e-7
Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 0
Query:   69 VPLVAEGGAQEVEVAFRTRMHDLVTKMNKEELSLEISGVPNLLTLALRLATHEGKIVADQRGQFLCKLPLLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPIL------SRGKYVLLRVCNGLVSRLSKTHDASFCGQV 204
            VP + E      ++A +  +     K+      L+ +G+  LL L +  A      VA+   QF    P  +LED ++SQ  ++C+ +W   +E   A LTA P        ++    LLR+CN L+ RLSKTH+  FCG++
Sbjct:   46 VPKLIESTQNIFDIAVQRIVATFSWKLVSGSSKLDTAGITALLDLCIDGA------VANILFQFA---PYKVLEDVMESQPIQTCEALWDI-LEVRKARLTASPFFDSSGRTTKSSLTLLRMCNALLRRLSKTHNTVFCGRI 177          
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Match: A0A419Q6V8_CLOSI (THO complex subunit 1 (Fragment) n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=A0A419Q6V8_CLOSI)

HSP 1 Score: 61.6 bits (148), Expect = 3.400e-7
Identity = 42/146 (28.77%), Postives = 75/146 (51.37%), Query Frame = 0
Query:   62 SRLKAQAVPLVAEGGAQEVEVAFRTRMHDLVTKMNKEELSLEISGVPNLLTLALRLATHEGKIVADQRGQFLCKLP--LLLLEDYLDSQGTESCKEMWGTWVEGNSAELTAEPILSRGKYVLLRVCNGLVSRLSKTHDASFCGQVK 205
            S+LK +A  +  +     ++VAFR+RM +L++  + +E       V +LL + +  A              +C  P   LL  D  +++    C+E++G ++E     L   P+ + G+  LLR+CN L+ RLSK+ +  FCGQ++
Sbjct:   49 SKLKTEAETIQLKDTKPVIDVAFRSRMLELLSSHSLDE-------VKSLLKVGVAAALAN-----------ICSAPTPFLLFSDVFNTKPISVCQELFG-FMEETITTLKDVPLFASGRNTLLRMCNDLLRRLSKSQNTVFCGQIQ 175          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7977.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2N9_ECTSI1.330e-1846.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W205_9STRA9.300e-1136.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A067CNZ3_SAPPC9.540e-1036.28Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S3MH41_9STRA6.000e-932.54Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A484EG24_BRELC6.430e-833.08Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A1V9ZSV5_9STRA1.540e-733.63THO complex subunit n=1 Tax=Thraustotheca clavata ... [more]
A0A2K1L077_PHYPA1.620e-746.15Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
T2M853_HYDVU2.070e-729.27THO complex subunit 1 n=2 Tax=Hydra vulgaris TaxID... [more]
A0A024GB19_9STRA2.180e-730.99Uncharacterized protein n=3 Tax=Albugo candida Tax... [more]
A0A419Q6V8_CLOSI3.400e-728.77THO complex subunit 1 (Fragment) n=1 Tax=Clonorchi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021861THO complex, subunit THOC1PFAMPF11957efThoc1coord: 129..205
e-value: 5.4E-10
score: 38.5
IPR021861THO complex, subunit THOC1PANTHERPTHR13265THO COMPLEX SUBUNIT 1coord: 65..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7977contigC-tenellus_contig7977:3665..6154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7977.2.1mRNA_C-tenellus_contig7977.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7977 3384..6185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7977.2.1 ID=prot_C-tenellus_contig7977.2.1|Name=mRNA_C-tenellus_contig7977.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=249bp
MVVAAHPLDTRLQTLLDAVNAPPSSGSLDLLLEALRPLRIILPPKEPVTN
AVAKGKGVDKDSRLKAQAVPLVAEGGAQEVEVAFRTRMHDLVTKMNKEEL
SLEISGVPNLLTLALRLATHEGKIVADQRGQFLCKLPLLLLEDYLDSQGT
ESCKEMWGTWVEGNSAELTAEPILSRGKYVLLRVCNGLVSRLSKTHDASF
CGQVKSKSTQSVSFHFWSLQVLRDGGSRWGGFVHRCDCRFRGGCWGWK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021861THO_THOC1