prot_C-tenellus_contig7897.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7897.1.1
Unique Nameprot_C-tenellus_contig7897.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length204
Homology
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BLAST of mRNA_C-tenellus_contig7897.1.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.550e-12
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 0 
Query:   58 GDITGLKVKASWFDRR---SSKEGGCKKSG---CRPRRVLDEKITA-ESRWSCKKSLLSHPEQHCTLTFILDEPQDITRIGIAFHEGNQIVRTLEVSLNGNKLLDRITSSGSTTDLEWFGMNAADVSRLTLQPIGMDEGEWIGITEVMIMVEI 203
            G +T + V A+  D R   SS + GC ++G   C   +  D  I+  ESRWSC  ++L   E  C + F   +PQDI  I +AF EGN+  RT+++ ++G   L     S + +     G+ A + S + L+ + +   EWI + EV+I V++
Sbjct:  160 GTMTEVNVSATAHDTRPGSSSGDVGCGETGGDGCAAIKAHDGIISEIESRWSCA-TMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGE--LTHTHESYADSTFNTLGVTATEASTVMLESVDLLSDEWISLLEVLIFVKV 309
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7897.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FI81_ECTSI2.550e-1232.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 72..202
e-value: 8.6E-6
score: 27.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7897contigC-tenellus_contig7897:2121..3913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7897.1.1mRNA_C-tenellus_contig7897.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7897 786..4009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7897.1.1 ID=prot_C-tenellus_contig7897.1.1|Name=mRNA_C-tenellus_contig7897.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=204bp
MNFLPAVALLFTTLGIGSPAAATIPTTDSPTPSPFATFSPTFSPTFSPIT
SVSEVVAGDITGLKVKASWFDRRSSKEGGCKKSGCRPRRVLDEKITAESR
WSCKKSLLSHPEQHCTLTFILDEPQDITRIGIAFHEGNQIVRTLEVSLNG
NKLLDRITSSGSTTDLEWFGMNAADVSRLTLQPIGMDEGEWIGITEVMIM
VEI*
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