prot_C-tenellus_contig7891.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7891.1.1
Unique Nameprot_C-tenellus_contig7891.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length261
Homology
BLAST of mRNA_C-tenellus_contig7891.1.1 vs. uniprot
Match: A0A225WX17_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WX17_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.310e-6
Identity = 33/102 (32.35%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    6 TEVTNDMMEIFAPRLLCLKSINLSSCRQISNLGVRALATSCKSTLTSIDISNCQKLNNEAIAYIGGTIGFGSS---CDILESLSLANCKGISNYALVALGRG 104
            T ++  M+++ A  +  L +++ SSC Q+ + GVR   + C ++LT +++S C  L ++A+ +IGG++G   S   C  L SL ++    I +  L ALG G
Sbjct:   86 TILSVSMLQVLATGIEHLDTLDFSSCSQLLSEGVREFISCCNTSLTRLNLSRCGALTDDALGWIGGSLGPQGSRTRCRRLISLDISYTAAICDRGLAALGEG 187          
BLAST of mRNA_C-tenellus_contig7891.1.1 vs. uniprot
Match: A0A662X6T9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6T9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.910e-6
Identity = 33/102 (32.35%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    6 TEVTNDMMEIFAPRLLCLKSINLSSCRQISNLGVRALATSCKSTLTSIDISNCQKLNNEAIAYIGGTIGFGSS---CDILESLSLANCKGISNYALVALGRG 104
            T ++  M+++ A  +  L +++ SSC ++ + GVR   + C ++LT +++S C  L ++A+ +IGGT+G   S   C  L SL ++    IS+  L AL  G
Sbjct:  115 TVLSVPMLQVLASGIERLDALDFSSCPKLLSEGVREFISCCNTSLTRLNLSRCAALTDDALGWIGGTLGPQGSRTRCRRLLSLDMSYTSAISDRGLAALSSG 216          
BLAST of mRNA_C-tenellus_contig7891.1.1 vs. uniprot
Match: A0A6G0WXC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXC0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.130e-6
Identity = 32/107 (29.91%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    1 VNLEGTEVTNDMMEIFAPRLLCLKSINLSSCRQISNLGVRALATSCKSTLTSIDISNCQKLNNEAIAYIGGTIGFG---SSCDILESLSLANCKGISNYALVALGRG 104
            ++  G+ V  D++++   RL  L+ ++ S+C  +S   +R     C  TL   ++S+ + +N+EA+A++ GT+G     + C  L SL++A C  + +  L ALG G
Sbjct:  112 LDYSGSIVQKDVLKVLVTRLEDLRDVDFSNCETLSPDILRDFIPCCTHTLEKCNLSHSKLINDEALAWLAGTLGVHGGLTKCGKLVSLNIAQCTLVGDRGLAALGVG 218          
BLAST of mRNA_C-tenellus_contig7891.1.1 vs. uniprot
Match: A0A662WGS7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGS7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.140e-6
Identity = 33/102 (32.35%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    6 TEVTNDMMEIFAPRLLCLKSINLSSCRQISNLGVRALATSCKSTLTSIDISNCQKLNNEAIAYIGGTIGFGSS---CDILESLSLANCKGISNYALVALGRG 104
            T ++  M+++ A  +  L +++ SSC ++ + GVR   + C ++LT +++S C  L ++A+ +IGGT+G   S   C  L SL ++    IS+  L AL  G
Sbjct:  150 TVLSVPMLQVLASGIEHLDALDFSSCLKLLSEGVREFISCCNTSLTRLNLSRCAALTDDALGWIGGTLGPQGSRTRCRRLLSLDMSYTNAISDRGLAALSSG 251          
BLAST of mRNA_C-tenellus_contig7891.1.1 vs. uniprot
Match: D7FGX1_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX1_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 5.910e-6
Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   33 QISNLGVRALATSCKSTLTSIDISNCQKLNNEAIAYIGGTIGFGSSCDILESLSLANCKGISNYALVALGR 103
            Q++NLGVRAL   CKSTLTS+D+S+C  LN+E      G       C  +  L+L +C  + N AL+AL +
Sbjct:    3 QLNNLGVRALVEYCKSTLTSVDLSDCTGLNDEVTTK--GVQYIARGCPNMSVLNLYHCGKVKNGALIALSK 71          
BLAST of mRNA_C-tenellus_contig7891.1.1 vs. uniprot
Match: A0A6H5JAP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAP1_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.170e-5
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 VNLEGTEVTNDMMEIFAPRLLCLKSINLSSCRQISNLGVRALATSC 46
            V+L  TE TN+M+ +FA RL CL++INL+SCRQ++  GV+ +A  C
Sbjct:   98 VDLSRTETTNEMLGVFAARLFCLRTINLTSCRQVTTKGVQYIARGC 143          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7891.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A225WX17_9STRA2.310e-632.35Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A662X6T9_9STRA2.910e-632.35Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A6G0WXC0_9STRA3.130e-629.91Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A662WGS7_9STRA3.140e-632.35Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D7FGX1_ECTSI5.910e-643.66Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A6H5JAP1_9PHAE2.170e-552.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 183..208
e-value: 5.2
score: 16.0
coord: 105..130
e-value: 2.3E-4
score: 30.5
coord: 79..104
e-value: 0.1
score: 21.7
coord: 157..182
e-value: 0.09
score: 21.9
coord: 131..156
e-value: 14.0
score: 13.3
coord: 20..45
e-value: 0.39
score: 19.8
coord: 47..72
e-value: 52.0
score: 9.0
coord: 209..234
e-value: 11.0
score: 14.2
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 22..43
e-value: 0.095
score: 12.8
coord: 105..127
e-value: 0.024
score: 14.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..73
e-value: 2.7E-11
score: 45.1
coord: 74..151
e-value: 9.5E-16
score: 59.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 152..238
e-value: 7.4E-16
score: 60.0
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 125..239
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 15..125
NoneNo IPR availablePANTHERPTHR13318:SF91F-BOX/LRR-REPEAT PROTEIN 3coord: 81..206
coord: 125..239
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 81..206
NoneNo IPR availablePANTHERPTHR13318:SF91F-BOX/LRR-REPEAT PROTEIN 3coord: 15..125
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7891contigC-tenellus_contig7891:963..3752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7891.1.1mRNA_C-tenellus_contig7891.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7891 963..3752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7891.1.1 ID=prot_C-tenellus_contig7891.1.1|Name=mRNA_C-tenellus_contig7891.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=261bp
VNLEGTEVTNDMMEIFAPRLLCLKSINLSSCRQISNLGVRALATSCKSTL
TSIDISNCQKLNNEAIAYIGGTIGFGSSCDILESLSLANCKGISNYALVA
LGRGCPKLRFLNLSGCEKVTTSGIKCLVKGCSKIAVLNLSECRKVQEGGL
IALSRHCSGLVSLNVASVGRVTDSSLAALGKGCPTLQAVNIAGAKEVSER
GLCALVQNCRGLHTLNVTGCTEVSLKGLRALIGGIGKLFVEEAKTFFGFL
PRQDMVNQKVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf