prot_C-tenellus_contig789.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig789.2.1
Unique Nameprot_C-tenellus_contig789.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length1469
Homology
BLAST of mRNA_C-tenellus_contig789.2.1 vs. uniprot
Match: D8LHL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL0_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.090e-27
Identity = 231/931 (24.81%), Postives = 344/931 (36.95%), Query Frame = 0
Query:   38 QLAGALKNHIGALSSAEILRSMLRVTPITSQALRLVRNCLAPLRDDEITKFEVPLEFAIN------SNSSCPR-LEFVHRVRPLLSEQLLAGKFLCLRRVEDTYFVVEESNSDALPPSPTPSLKCTDDS-------------------GGWDAGKSPLLSYLRRDDSFDSTHPQSPEEDSSEG----------GDDDVFH-----AKH-------YVVPYWAILGIEEGDTLLPESDNNDTVEVKVADPGVDVDLVCGGLRINEGGDFIGKLAVGSVAHVHGSGELSVNFKNGTSTKGGVDGKGESQIEAEDKEHVTDSAGKLTTILRPSRASLGRETFKVKIRVSLHHPKGTPLYEGKAKVVIDLHLRLLAIERRVNQLLLLKDMADTQAASEVLIAPP-PPDELATLPTLTQL----GQSSSSTGSARCILDESTNKIG--IGGQGGGAFRRSAAHGHHRR--------KPSGGAVDRAMEEKHITACRAGVKLGEAAA------AAGXXXXXXXXXXXXTIASGKEEGGLTLLSRR-----CPATAGLIGGTGDESRERVGSVHMSEGA--GRCEGDSGPLAHSTRTCVGDGQREDGRQKGRDEEDSEWVMGREESKLERRVLTELLKYRQLGIGGFFIGEMACPCVYTRRFPLYYRLHSSNSLIKLRDKFQNLGVSAQGRPGVLAYRTHHGHIFYILLTEGTESGTDGVSSAADEKKS---FIDLSVHGVEEVGSDITKDLCNVIETNIFELGCDQLWSLLRKNKCFPITFADREFIENCGNA-------GMDLAAVQSQTKDIAGSVSTESXXXXXXXXXXXXXXXXXXXXXNNAKGSADTEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVLPGYESVVFFLPVG-VKDLYLFLMYLRQALCSDEYIHPLVTAPHVASP 881
            +L  AL+ HI  +  +E+LRS+LR TP+T   L  VR CL P+  +EIT+F VPLEF ++      S +  PR L  +   R LL ++LL GK  C RR ++          +    +PT   K   DS                      D G +P L   +  D   S  P    + S++G          G DD  H     ++H       Y VPYW I+ + E                   DPG + +                 L   S A     G+ +  F   +                                  P  AS          +VS+HHP+G+ +   K  V+  +   L    RRVNQL+LL+ +  T+ A EVLI PP PP    T P + ++    G + S+  + R   +  T   G  +GG GGG+ R     G   R         P+G A   A   K          +G ++A      AAG             +  G   GG  LLS+      C  T         ++R  V  V   E +     +G   P +  T+  +  G  E GR       +S                  +L  R+LG   F  GE+ C C Y+RRFPLY+RL +   L+ L     + G+   GR  +       G+ FY+ L+E      D  S  + ++ S    I+L V+G+E++ +++ + L + IE  + + G + L S L  N    +T AD EF+    NA       G+    V  + +      S                        +++KGS     +                               PA LPG+    F LP G V D +L L YLR  LC+D  +  L +A + + P
Sbjct: 1396 RLTEALREHIDKIYCSEVLRSLLRRTPVTMPTLMTVRRCLRPVPAEEITRFLVPLEFMVDISTEPHSANIGPRGLRSIANARELLDQELLRGKAPCFRRAKEEXXXXXXXXGEGGQEAPT---KAVSDSLRQDIEAAKGLLFVVEERVRAGDEGAAPPLHGCQAGDGVSSPPPPPRIDASADGRRNGATRTDVGVDDNAHNGGDSSRHPAEANDDYSVPYWGIVRVGE----------------LTNDPGEEPEPW--------------PLYGASRARTRQLGKTAHAFSKPS---------------------------------EPMPAS----------QVSVHHPRGSTVSANKGTVIDGIKRGLHLAARRVNQLMLLESLIQTRVACEVLIPPPRPPATTTTAPDMPEVLRVGGVTYSNPRARRPKANALTGGAGAPLGGVGGGS-RSIDDKGVGERGGLLMQSPPPAGTASPVASAAKDAGVVARDGAVGTSSAFVAPESAAGTGGSSDRKKLSPRV-DGIGPGGEGLLSKASTWAGCSLTV--------DTRSVVRGVFRRENSLDAANKGSGSPCSSPTQLVLDGGGGESGRVVDGRATNSTHXXXXXXXXXXXXXGGLVLPQRELG-QAFREGELQCECKYSRRFPLYHRLQAQMVLVTLATTALD-GLRVHGRSDLYVCPDQLGN-FYMTLSESPRR--DAASRGSRQEASSQPVIELKVYGIEDLSTELKRRLNDKIEFKLAKQGWEALSSQLGMNDHLNVTAADWEFVRTGPNADLARDSGGVSRGGVTGRVQQATSRGSGSGGEEFVARAADEQTRQEKSHSDSSSKGSFTAATTKVHKEDRGGKEGAA-----------------PASLPGHGRAWFSLPAGGVLDTFLLLQYLRSVLCADGLMKILHSATNESQP 2218          
BLAST of mRNA_C-tenellus_contig789.2.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.770e-12
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 0
Query:   34 RTHEQLAGALKNHIGALSSAEILRSMLRVTPITSQALRLVRNCLAPLRDDEITKFEVPLEFAINS-NSSCPRLEFVHRVRPLLSEQLLAGKFLCLRRVEDTYFVVEESNSDA 144
            R HE +   +   + ALSSAEILRS+L V+P+T   L LV+ CL PLR  E+T+  +PL F +++ +    +  F  RVR LL EQL A   L LR+V   ++VV ++  DA
Sbjct: 2076 RLHEHVTALVVRGLEALSSAEILRSLLAVSPVTRATLGLVQRCLRPLRAPELTRLRLPLRFVLDAAHGPEAQAAFAARVRALLDEQLQADAALALRKVGALFYVVRDAALDA 2187          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig789.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHL0_ECTSI2.090e-2724.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7M7_9STRA2.770e-1242.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 771..828
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..573
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..573
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 793..811
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..454
IPR033228Protein SZT2PANTHERPTHR14918KICSTOR COMPLEX PROTEIN SZT2coord: 36..741

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig789contigC-tenellus_contig789:4813..16697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig789.2.1mRNA_C-tenellus_contig789.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig789 4813..16699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig789.2.1 ID=prot_C-tenellus_contig789.2.1|Name=mRNA_C-tenellus_contig789.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=1469bp
EEQSTIGTRYAGTGGLAVPATAALGAPEEGRLLRTHEQLAGALKNHIGAL
SSAEILRSMLRVTPITSQALRLVRNCLAPLRDDEITKFEVPLEFAINSNS
SCPRLEFVHRVRPLLSEQLLAGKFLCLRRVEDTYFVVEESNSDALPPSPT
PSLKCTDDSGGWDAGKSPLLSYLRRDDSFDSTHPQSPEEDSSEGGDDDVF
HAKHYVVPYWAILGIEEGDTLLPESDNNDTVEVKVADPGVDVDLVCGGLR
INEGGDFIGKLAVGSVAHVHGSGELSVNFKNGTSTKGGVDGKGESQIEAE
DKEHVTDSAGKLTTILRPSRASLGRETFKVKIRVSLHHPKGTPLYEGKAK
VVIDLHLRLLAIERRVNQLLLLKDMADTQAASEVLIAPPPPDELATLPTL
TQLGQSSSSTGSARCILDESTNKIGIGGQGGGAFRRSAAHGHHRRKPSGG
AVDRAMEEKHITACRAGVKLGEAAAAAGEAVGEVVTKVVTTIASGKEEGG
LTLLSRRCPATAGLIGGTGDESRERVGSVHMSEGAGRCEGDSGPLAHSTR
TCVGDGQREDGRQKGRDEEDSEWVMGREESKLERRVLTELLKYRQLGIGG
FFIGEMACPCVYTRRFPLYYRLHSSNSLIKLRDKFQNLGVSAQGRPGVLA
YRTHHGHIFYILLTEGTESGTDGVSSAADEKKSFIDLSVHGVEEVGSDIT
KDLCNVIETNIFELGCDQLWSLLRKNKCFPITFADREFIENCGNAGMDLA
AVQSQTKDIAGSVSTESTAGALGGVGGTSGNGGAGEAGNNAKGSADTEGS
GTETGTGSGSAQVGVGADGDGDGPTGTMAPAPAVLPGYESVVFFLPVGVK
DLYLFLMYLRQALCSDEYIHPLVTAPHVASPSPPPHPVANTSPKLTSTAD
PLVLVSASGKNAAEADGVGCMRTGTEDLKGVLGVELAEAETKKDSGDEVT
TATGTWALPSHGQKTESAKHKGREGVPETGNGLTDAGTTLSWIQTTAVRG
QESSGGTVVLDSDQVSVLGDSTEEDLHNEYVVDTKAELDGESQGAGGGSG
GSFIEEVVLDPGELTFFYLSQQPPKNMDKPAARQTPSARKVGEGVAIIDL
MPVGLGKGNGQEVRMTTLGTGHHPEASIEELESLAEEAGMGVDVTARSMR
FSSSSLTDRRQSRSGSGSALTYLIDEDNMEGEGKVVDNVAEDEEENQHVE
EWGMGSRLEVGRGCPCIKLEVYACGKINMPYLMDLLQGCFKQALVEYAIE
RVLLRDRAGSGMERGMAEGSASFNGDTTPAVAATAAAGGGDANSVEINVA
STGAEEAGMVRKGSGLVRSMVPFGISPPLSQMHQDQSGHDKGASLGDVKK
VCHLMSGLMDEAVKCNSHATVRVEARESIPWYALLPIVRDLVQDVGKRHV
PFTDCTVTVHLPGDRGGSRGMGGRSVGLVQQLQWDQTSCSWWKKGAPNNP
GTYLMVFGMYMEGVPKTNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033228SZT2