prot_C-tenellus_contig7883.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7883.2.1
Unique Nameprot_C-tenellus_contig7883.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length192
Homology
[Close]
BLAST of mRNA_C-tenellus_contig7883.2.1 vs. uniprot
Match: A0A7S0VUI0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUI0_9CRYP)

HSP 1 Score: 66.6 bits (161), Expect = 1.750e-9
Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:  125 EDVKVDLISMVHVGDSAYYRDIVRDAEG-YDRVLFELIVGTDVVSKDDEGRRKIVERVYPTRDQ 187
            E+V VD++S+VH+ D  YYR+I + A+  +DRVLFELI  T +VS D++GRR++ E + P  DQ
Sbjct:  202 EEVTVDIVSLVHLADPRYYREIQQFADSKHDRVLFELIADTSLVSTDEQGRRRLSEHLLPAPDQ 265
[Close]
BLAST of mRNA_C-tenellus_contig7883.2.1 vs. uniprot
Match: A0A7S1ECB4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ECB4_HEMAN)

HSP 1 Score: 58.5 bits (140), Expect = 9.710e-7
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 0 
Query:  125 EDVKVDLISMVHVGDSAYYRDIVRDAEG-YDRVLFELIVGTDVVSKDDEGRRKIVERVYPTRDQ 187
            +++ VD++S+VH+ D  YYR+I + A+  +DRVL+ELI  + ++S D EGR ++ E + P  DQ
Sbjct:   83 KEMTVDIVSLVHLADPRYYREIQQFADSQHDRVLYELIADSSLISTDPEGRSRLKEHLLPAPDQ 146
[Close]
BLAST of mRNA_C-tenellus_contig7883.2.1 vs. uniprot
Match: A0A7S1E8V3_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E8V3_HEMAN)

HSP 1 Score: 58.5 bits (140), Expect = 1.050e-6
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 0 
Query:  125 EDVKVDLISMVHVGDSAYYRDIVRDAEG-YDRVLFELIVGTDVVSKDDEGRRKIVERVYPTRDQ 187
            +++ VD++S+VH+ D  YYR+I + A+  +DRVL+ELI  + ++S D EGR ++ E + P  DQ
Sbjct:  213 KEMTVDIVSLVHLADPRYYREIQQFADSQHDRVLYELIADSSLISTDPEGRSRLKEHLLPAPDQ 276
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7883.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S0VUI0_9CRYP1.750e-950.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1ECB4_HEMAN9.710e-742.19Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1E8V3_HEMAN1.050e-642.19Hypothetical protein (Fragment) n=3 Tax=Hemiselmis... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7883contigC-tenellus_contig7883:4037..4612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7883.2.1mRNA_C-tenellus_contig7883.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7883 3972..4758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7883.2.1 ID=prot_C-tenellus_contig7883.2.1|Name=mRNA_C-tenellus_contig7883.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=192bp
MAGTGPCFAVLALTALPLPAMGFNSQPHPTPYPIKSKMFRHRLVIKAVQG
SGGELRQALSSKTSKGPFRLMKTGTSVELQTASYTLVCPSPSQVPGGRVP
SRADDDMVPGSLFSTFGMKEGEIQEDVKVDLISMVHVGDSAYYRDIVRDA
EGYDRVLFELIVGTDVVSKDDEGRRKIVERVYPTRDQVWGG*
back to top