prot_C-tenellus_contig7878.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7878.2.1
Unique Nameprot_C-tenellus_contig7878.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length50
Homology
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5JKV2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV2_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.070e-11
Identity = 24/48 (50.00%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y+++EG ++++ +PI+ F +KHIDVRHHFL+QLV +K +E++HV S+
Sbjct:   57 LYEDHEGAIQIAIHPISNFNSKHIDVRHHFLRQLVDEKEVEIIHVASK 104          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5K0P8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P8_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.130e-11
Identity = 25/48 (52.08%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +YK+NEG ++++ +PI+   +KHIDVRHHFL+QLV +K +E++HV S+
Sbjct: 1233 LYKDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASK 1280          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.260e-10
Identity = 24/48 (50.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG ++++ +PI+   +KHIDVRHHFL+QLV +K +E++HV S+
Sbjct:  310 LYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQ 357          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.300e-10
Identity = 24/48 (50.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG ++++ +PI+   +KHIDVRHHFL+QLV +K +E++HV S+
Sbjct:  362 LYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQ 409          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.310e-10
Identity = 24/48 (50.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG ++++ +PI+   +KHIDVRHHFL+QLV +K +E++HV S+
Sbjct:  543 LYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQ 590          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5JR13_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR13_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.310e-10
Identity = 24/48 (50.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG ++++ +PI+   +KHIDVRHHFL+QLV +K +E++HV S+
Sbjct:  296 LYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQ 343          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5KFD2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD2_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.780e-10
Identity = 24/48 (50.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG ++++ +PI+   +KHIDVRHHFL+QLV +K +E++HV S+
Sbjct:  383 LYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASK 430          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5JFL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL1_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.780e-10
Identity = 23/48 (47.92%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG ++++ +PI+   +KHID RHHFL+QLV +K +E++HV S+
Sbjct:   57 LYEDNEGAIQIAKHPISNSNSKHIDARHHFLRQLVDEKEVEIIHVASK 104          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5KL18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL18_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.790e-10
Identity = 25/48 (52.08%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG +++  +PI+   +KHIDVRHHFL+QLV +K +EV+HV S+
Sbjct:  638 LYEDNEGAIQIEKHPISNSNSKHIDVRHHFLRQLVDEKEVEVIHVASK 685          
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Match: A0A6H5KKT4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT4_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.790e-10
Identity = 24/48 (50.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSE 48
            +Y++NEG +K++ +PI+   +KHI+VRHHFL+QLV +K +E++HV S+
Sbjct:  833 LYEDNEGTIKIAKHPISNSNSKHIEVRHHFLRQLVDEKEVEIIHVASK 880          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7878.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKV2_9PHAE1.070e-1150.00Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0P8_9PHAE5.130e-1152.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JWK8_9PHAE1.260e-1050.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRZ9_9PHAE1.300e-1050.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K307_9PHAE1.310e-1050.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JR13_9PHAE1.310e-1050.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KFD2_9PHAE1.780e-1050.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFL1_9PHAE1.780e-1047.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL18_9PHAE1.790e-1052.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKT4_9PHAE1.790e-1050.00Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7878contigC-tenellus_contig7878:4755..4904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7878.2.1mRNA_C-tenellus_contig7878.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7878 4755..4904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7878.2.1 ID=prot_C-tenellus_contig7878.2.1|Name=mRNA_C-tenellus_contig7878.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=50bp
MYKNNEGVVKLSGNPINGFRTKHIDVRHHFLKQLVSDKIIEVVHVVSEE*
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