prot_C-tenellus_contig7859.6.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7859.6.1
Unique Nameprot_C-tenellus_contig7859.6.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length45
Homology
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A835YLV8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV8_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.950e-16
Identity = 36/45 (80.00%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            ++LRF FYL+FFGI+FTFYG+PLHIVRDLWVSY+ LRRRLQA+NR
Sbjct:  232 ELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNR 276          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: F0YMN2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMN2_AURAN)

HSP 1 Score: 69.7 bits (169), Expect = 6.350e-13
Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            +VLRF FY+VFF I+FT+YG+PLHIVR+LWVSY +LRRRL A+ R
Sbjct:  229 EVLRFAFYVVFFTIVFTYYGVPLHIVRELWVSYVSLRRRLAAYKR 273          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.800e-12
Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            +V+RFL Y+VFF IIFT+YG+PLHIVRDLW+SY NL+RRL  FN+
Sbjct:  219 EVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNK 263          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A7S2GDQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDQ5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.530e-12
Identity = 30/45 (66.67%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            +++RF+ YL+FF IIFT+YG+PLHI+R+LWVSY NLRRRL A+ R
Sbjct:   96 EMVRFIAYLIFFTIIFTYYGMPLHIIRELWVSYQNLRRRLVAYQR 140          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A7S4DEQ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEQ8_HETAK)

HSP 1 Score: 63.5 bits (153), Expect = 3.360e-11
Identity = 27/45 (60.00%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            +V+RF FYLVFF ++FT+YG+PLH+VRDLW  Y+ LR+RL+A+ +
Sbjct:   62 EVVRFGFYLVFFALVFTYYGVPLHLVRDLWGCYSKLRKRLEAYRK 106          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A8J2SMG0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMG0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 7.660e-11
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            +VLRF  Y+VFF I+F +YG+PLHIVR+LW SY  LR+RLQAF +
Sbjct:  220 EVLRFAAYVVFFSIVFAYYGVPLHIVRELWASYVQLRQRLQAFKK 264          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A662Y1M1_9STRA (RING-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1M1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.140e-8
Identity = 27/45 (60.00%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            ++++ L YLVFF +IFT+YG+PLHIVRDLWVS  NL+RR+ ++ R
Sbjct:  225 EIVKLLVYLVFFLLIFTYYGMPLHIVRDLWVSIKNLQRRVASYFR 269          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: M4C0U1_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0U1_HYAAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.140e-8
Identity = 25/45 (55.56%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            +V++ + YL+FF +IF +YG+PLHIVRDLWVS+ NL+RR+ ++ R
Sbjct:  219 EVIKLVVYLIFFMLIFAYYGMPLHIVRDLWVSFKNLQRRISSYFR 263          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A024GDM0_9STRA (RING-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDM0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.140e-8
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR 45
            +V++ + YLVFF +IF FYG+PLHIVRDLW+S  NL+RR+ +F R
Sbjct:  219 EVIKLIIYLVFFMLIFKFYGMPLHIVRDLWLSIRNLQRRIASFFR 263          
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Match: A0A7S2GY65_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GY65_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.540e-8
Identity = 24/41 (58.54%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    4 RFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFN 44
            +FLFYL+FF I+FT+YG+P++I R++++SY NLR+RL AF+
Sbjct:   30 KFLFYLIFFAIVFTYYGMPINIFREVYMSYQNLRKRLSAFH 70          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7859.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLV8_9STRA3.950e-1680.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
F0YMN2_AURAN6.350e-1371.11Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A4D9CLU7_9STRA1.800e-1271.11RING-type domain-containing protein n=2 Tax=Monodo... [more]
A0A7S2GDQ5_9STRA4.530e-1266.67Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4DEQ8_HETAK3.360e-1160.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J2SMG0_9STRA7.660e-1164.44Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A662Y1M1_9STRA1.140e-860.00RING-type domain-containing protein n=2 Tax=Nothop... [more]
M4C0U1_HYAAE1.140e-855.56RING-type domain-containing protein n=1 Tax=Hyalop... [more]
A0A024GDM0_9STRA1.140e-860.00RING-type domain-containing protein n=1 Tax=Albugo... [more]
A0A7S2GY65_9STRA1.540e-858.54Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7859contigC-tenellus_contig7859:6299..6433 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7859.6.1mRNA_C-tenellus_contig7859.6.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7859 6299..6433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7859.6.1 ID=prot_C-tenellus_contig7859.6.1|Name=mRNA_C-tenellus_contig7859.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=45bp
KVLRFLFYLVFFGIIFTFYGIPLHIVRDLWVSYTNLRRRLQAFNR
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