prot_C-tenellus_contig7845.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7845.1.1
Unique Nameprot_C-tenellus_contig7845.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length259
Homology
BLAST of mRNA_C-tenellus_contig7845.1.1 vs. uniprot
Match: D8LSP7_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP7_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 6.710e-30
Identity = 83/179 (46.37%), Postives = 111/179 (62.01%), Query Frame = 0
Query:   55 VFLLDRLGEGHEAALEAAQEAVAKAVNEPGGENMLTFSWIDTPCQAGFADAVGLTDASAIPGLVVFSPRRLRLSRFLGAWESESMSRFLGGVLGGRVSTHPIS-QQPRLEEDNGCSSRQLP--VQGGAEEGSTVQDSSEED--MEAFMAEIRAEEERAQKELAEEVERELKELQDAEAA 228
            VF LDR  E   + L AA+EA  KA    GG   + F W D PCQ GFA  +G++DAS +P LV FS +  + +RF+GAWE++S+  FLG  LGGRV   P+  + PR +E   C+ R  P  + GG   G    D++EED  M  FMAEI AEE +A++EL EEV R L+E++DA+ A
Sbjct:  671 VFFLDRFSERFASDLRAAEEAAEKATARLGGGG-IAFVWADAPCQEGFAKTLGVSDASEVPVLVAFSSKHKKSTRFVGAWEADSLGTFLGRALGGRVPLFPVDGEAPRPDESVDCAQRPPPAWLAGG---GEGTGDAAEEDDGMGDFMAEILAEEAKAKRELEEEVARGLQEMEDAKGA 845          
BLAST of mRNA_C-tenellus_contig7845.1.1 vs. uniprot
Match: A0A835YSS6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.730e-6
Identity = 49/183 (26.78%), Postives = 81/183 (44.26%), Query Frame = 0
Query:   32 LEEATADNFSERLCPEEGARLCAVFLLDRLGEGHEAALEAAQEAVAKAVNE-----PGGENMLTFSWIDTPCQAGFADAVG----LTDASAIPGLVVFSPRRLRLSRFLGAWESESMSRFLGGVLGGRVSTHPISQQPRLEEDNGCSSRQLPVQGGAEEGSTVQDSSEEDMEAFMAEIRAEEE 205
            L E TAD++ + +C      LC + L+       +A       AV + +       P G N    +++   CQ  F   +G    L  +  +P ++V+ P+R R+S  +G +E E++  FL  V   + S+  + Q P   + N C+   L ++       T  +  E DM   MAEI  EEE
Sbjct:  443 LVEITADSWEKDVCLPNQTSLCIIALVPTASADTQAKAADPLMAVTEVLQNTIPLRPDGSNPWQVAFVRADCQPEFVAGLGFQADLFSSGTLPSMLVYIPKRSRVSHLVGHFEKEAVRSFLSDVFSSKASSSVLHQIPAPVKRN-CTDFMLEMR------ITAGEEDEGDMADMMAEILKEEE 618          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7845.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSP7_ECTSI6.710e-3046.37Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835YSS6_9STRA2.730e-626.78Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7845contigC-tenellus_contig7845:1090..5643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7845.1.1mRNA_C-tenellus_contig7845.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7845 63..6591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7845.1.1 ID=prot_C-tenellus_contig7845.1.1|Name=mRNA_C-tenellus_contig7845.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=259bp
MEAEGDLEDNNSRGNTRYTSTPESTTPWGGVLEEATADNFSERLCPEEGA
RLCAVFLLDRLGEGHEAALEAAQEAVAKAVNEPGGENMLTFSWIDTPCQA
GFADAVGLTDASAIPGLVVFSPRRLRLSRFLGAWESESMSRFLGGVLGGR
VSTHPISQQPRLEEDNGCSSRQLPVQGGAEEGSTVQDSSEEDMEAFMAEI
RAEEERAQKELAEEVERELKELQDAEAASAAEGDKPKKRTKIIKRRKKKG
SKTAGGEL*
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