prot_C-tenellus_contig7829.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7829.1.1
Unique Nameprot_C-tenellus_contig7829.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length53
Homology
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BLAST of mRNA_C-tenellus_contig7829.1.1 vs. uniprot
Match: D7FXX0_ECTSI (CDAN1-interacting nuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX0_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.450e-19
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = 0 
Query:    1 MHTPSLIMDNRLRGEIELCLEEDRDYSPHIDRVRRTMGAEYEFVLQQKLRAR 52
            M TPSLI+D RLR E+E C+ +DRDYSPH+DRVRR +GAEYEFVLQQKLRAR
Sbjct:  108 MRTPSLILDERLRREVEECISDDRDYSPHLDRVRRGVGAEYEFVLQQKLRAR 159
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BLAST of mRNA_C-tenellus_contig7829.1.1 vs. uniprot
Match: A0A0D2VQM9_CAPO3 (CDAN1-interacting nuclease 1 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VQM9_CAPO3)

HSP 1 Score: 50.4 bits (119), Expect = 8.160e-6
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0 
Query:    1 MHTPSLIMDNRLRGEIELCLEEDRDYSPHIDRVRRTMGAEYEFVLQQKLR 50
            M  P LI D  LR E++ C++ D   SP ++RV+  +GAEYE +LQ+KLR
Sbjct:  143 MQRPELIPDLVLRREVQCCIQYDDMTSPLVERVKHCVGAEYEALLQEKLR 192
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7829.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXX0_ECTSI1.450e-1976.92CDAN1-interacting nuclease 1 n=1 Tax=Ectocarpus si... [more]
A0A0D2VQM9_CAPO38.160e-648.00CDAN1-interacting nuclease 1 n=2 Tax=Capsaspora ow... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029404CDAN1-interacting nuclease 1PFAMPF14811TPDcoord: 9..51
e-value: 4.1E-8
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7829contigC-tenellus_contig7829:188..346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7829.1.1mRNA_C-tenellus_contig7829.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7829 188..370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7829.1.1 ID=prot_C-tenellus_contig7829.1.1|Name=mRNA_C-tenellus_contig7829.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=53bp
MHTPSLIMDNRLRGEIELCLEEDRDYSPHIDRVRRTMGAEYEFVLQQKLR
AR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029404CDIN1