prot_C-tenellus_contig782.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig782.1.1
Unique Nameprot_C-tenellus_contig782.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length268
Homology
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A835Z6M7_9STRA (ATP-binding cassette superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.240e-28
Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 0
Query:  159 LVLLTLTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMG-KDIDNPDQRIT 261
            L+LL LTLA  GV IVF+FLG  FW++LS  +P  F RL+  F VA+ VGAP++ALQ+Y KD + L WR  LTRR++  YL  GAYY +E+  KDIDNPDQR+T
Sbjct:   19 LLLLALTLAVSGVGIVFNFLGRDFWEALSEKDPVQFGRLVRKFLVALLVGAPLIALQEYVKDHIDLAWRCSLTRRVLRSYLHGGAYYALELEHKDIDNPDQRVT 122          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A835GZG7_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835GZG7_9MAGN)

HSP 1 Score: 99.8 bits (247), Expect = 4.630e-20
Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 0
Query:  127 VEGTRNDVLRGLSTLFEICR---SCGEMEGLSLQLLVLLTLTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRITVSDLTT 267
            VE  R D+   L   +++     S  +     L+L  L TLTLAT G+S+ FSFLG  F+++L++ + E FS+ L  +  A A G P   L+DYA++ +ALRWR  +T   I  YL++  +YTI+    IDNPDQRI V DL++
Sbjct:   35 VEKRRPDLATLLRRFWKVAAPYWSSTDQTQARLRLAALFTLTLATTGISVGFSFLGRDFYNALANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLALRWRSWMTSYYIERYLKNQTFYTIQSQSMIDNPDQRI-VDDLSS 177          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A6H5JDG1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDG1_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 9.910e-20
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 0
Query:  147 SCGEMEGLSLQLLVLLTLTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRI 260
            SC E  G    L  ++ LTL   GVS+ FS++G  FW +LS+ +P  F+ +L  F +A+  G PV     + + ++AL WR+ +T+R++  Y     YY +E  K+IDNPDQRI
Sbjct:  162 SCREENGARWLLATVVALTLLNSGVSVAFSYIGRDFWTALSNKDPAQFNIMLQRFLLALIAGVPVTVFYRFERQKLALSWREWMTKRVMEIYYSGQTYYALEASKEIDNPDQRI 275          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: I0YV23_COCSC (ATP-binding cassette transporter (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YV23_COCSC)

HSP 1 Score: 96.7 bits (239), Expect = 5.250e-19
Identity = 45/105 (42.86%), Postives = 71/105 (67.62%), Query Frame = 0
Query:  157 QLLVLLTLTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRIT 261
            QL  ++ LTL T GVS++F+FLG  F+++LS  + E F+++L  +   + +G PV   +DY + R+AL WRD++TRR+   Y ++  +Y I+ G  IDNPDQRI+
Sbjct:   25 QLAGVVALTLGTTGVSVLFNFLGRDFFNALSEKDAERFTQMLIKWLGGVVLGVPVFVFRDYVQSRLALDWRDYMTRRLTEDYFRNRTFYQIQSGTLIDNPDQRIS 129          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A8J9SLP9_9CHLO (Vitamin B12 transport ATP-binding protein BacA n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SLP9_9CHLO)

HSP 1 Score: 95.5 bits (236), Expect = 1.380e-18
Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = 0
Query:  157 QLLVLLTLTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRIT 261
            QL  ++ LTL T GVS++F+FLG  F+++LS  + + F+++L  +   + +G PV   +DY + ++AL WRD++TRR+   Y Q+  +Y I+ G  IDNPDQRI+
Sbjct:   29 QLAGVVALTLGTTGVSVLFNFLGRDFFNALSEKDADRFTQMLIKWLGGVVLGVPVFVFRDYLQSKLALDWRDYMTRRLTEEYFQNRTFYQIQSGSLIDNPDQRIS 133          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A7S2U7G0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7G0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.470e-18
Identity = 42/97 (43.30%), Postives = 64/97 (65.98%), Query Frame = 0
Query:  164 LTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRI 260
            +TL   GVS+ FS++G  FW +L S + + F  +L  FG A+ VGAPV  L  + ++++A+ WR+ +T R +  Y  + AYY +E G++IDNPDQRI
Sbjct:  118 MTLLNSGVSVAFSYIGKDFWSALGSKDADQFYAMLVKFGGALVVGAPVSVLYRFQREQLAVHWREWMTDRTLQLYASNRAYYALERGQEIDNPDQRI 214          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A1S4ATD8_TOBAC (ABC transporter D family member 2, chloroplastic-like isoform X1 n=10 Tax=Nicotiana TaxID=4085 RepID=A0A1S4ATD8_TOBAC)

HSP 1 Score: 95.1 bits (235), Expect = 1.970e-18
Identity = 47/112 (41.96%), Postives = 74/112 (66.07%), Query Frame = 0
Query:  156 LQLLVLLTLTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRITVSDLTT 267
            LQL  +  LTL T G+S+ F+FLG  F+++L++ + E F++ L  +  A A G P+  L+DYA++++ALRWR  +T   +  YL++  +Y I+    IDNPDQRI V DL++
Sbjct:   95 LQLAAVFALTLGTTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLAAFAGGIPIFVLRDYAREKLALRWRSWMTSYYMERYLKNKTFYKIQSQSTIDNPDQRI-VDDLSS 205          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A6V1QMT5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QMT5_HETAK)

HSP 1 Score: 94.7 bits (234), Expect = 2.650e-18
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 0
Query:  164 LTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRI 260
            LTL   GVS+ FS++G  FW +LS+  PE F  +L  F  A+  G PV     + +D++AL WR+ +TRRI+  Y  +  YY +E  +++DNPDQRI
Sbjct:  114 LTLLNSGVSVAFSYIGRDFWTALSNKNPEEFYLMLQKFMAALVAGVPVTVSYKFQRDKLALGWREWMTRRIMAIYYANRTYYALEASREVDNPDQRI 210          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A448ZPF5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPF5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.750e-18
Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = 0
Query:  164 LTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRI 260
            LTL   GVS+ FS++G  FW++LSS     F  +LG +  A+ VGAP+V L  + ++R+A+ WR+ +T R +  Y  +  YY IE G ++DNPDQRI
Sbjct:  145 LTLLNSGVSVGFSYIGKDFWNALSSKNTVDFYNVLGKYLGALLVGAPIVTLYKFQRERLAVHWREWMTNRTLQLYEDNRVYYVIERGGEVDNPDQRI 241          
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Match: A0A1E7FND4_9STRA (ABC transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FND4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 3.190e-18
Identity = 41/97 (42.27%), Postives = 65/97 (67.01%), Query Frame = 0
Query:  164 LTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGLFGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMGKDIDNPDQRI 260
            LTL    VS+ FS++G  FW++LS+   + F ++L  +  A+ VGAP+V L  Y ++R+A+ WR+ +T R +  Y ++  YY IE G+++DNPDQRI
Sbjct:    4 LTLLNSSVSVGFSYIGKDFWNALSAKNADEFYKVLTQYLGALCVGAPIVTLYRYQRERLAIHWREWMTERTLQLYEENRVYYAIERGREVDNPDQRI 100          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig782.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6M7_9STRA1.240e-2857.69ATP-binding cassette superfamily n=1 Tax=Tribonema... [more]
A0A835GZG7_9MAGN4.630e-2040.97Uncharacterized protein n=2 Tax=Coptis chinensis T... [more]
A0A6H5JDG1_9PHAE9.910e-2039.47ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
I0YV23_COCSC5.250e-1942.86ATP-binding cassette transporter (Fragment) n=1 Ta... [more]
A0A8J9SLP9_9CHLO1.380e-1841.90Vitamin B12 transport ATP-binding protein BacA n=1... [more]
A0A7S2U7G0_9STRA1.470e-1843.30Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1S4ATD8_TOBAC1.970e-1841.96ABC transporter D family member 2, chloroplastic-l... [more]
A0A6V1QMT5_HETAK2.650e-1843.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A448ZPF5_9STRA2.750e-1844.33Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FND4_9STRA3.190e-1842.27ABC transporter n=1 Tax=Fragilariopsis cylindrus C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF06472ABC_membrane_2coord: 155..261
e-value: 1.1E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR11384:SF59ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3coord: 142..261
NoneNo IPR availablePANTHERPTHR11384ATP-BINDING CASSETTE, SUB-FAMILY D MEMBERcoord: 142..261
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 219..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..178
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig782contigC-tenellus_contig782:6355..9467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig782.1.1mRNA_C-tenellus_contig782.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig782 5334..10413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig782.1.1 ID=prot_C-tenellus_contig782.1.1|Name=mRNA_C-tenellus_contig782.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=268bp
MFVPSVVAVALLFGNVQPCLSKVLVGGRGPSQRDLGSLVIKYGLEPPDGT
TLCRHFVLLRGGHGYQKQANLKSEDEKKKLEGAMGNNSCFSGKNGRIGVE
SGKGIWWWRRKSLRWLSLKLYILRSAVEGTRNDVLRGLSTLFEICRSCGE
MEGLSLQLLVLLTLTLATCGVSIVFSFLGARFWDSLSSNEPEGFSRLLGL
FGVAMAVGAPVVALQDYAKDRVALRWRDHLTRRIIHGYLQSGAYYTIEMG
KDIDNPDQRITVSDLTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom