prot_C-tenellus_contig7793.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7793.2.1
Unique Nameprot_C-tenellus_contig7793.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length80
Homology
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BLAST of mRNA_C-tenellus_contig7793.2.1 vs. uniprot
Match: D7FT18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT18_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 5.910e-17
Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:    4 YGLGKRVPRKQVAEIMKYVRDQTQELDIEEKRWFSSVGIVCMVFGVLLLLMRVAVGDLRTNPTPQR 69
            YGLG++VPR +VA IM+YV+ Q  +LD++E RWF+ +GIVC VFG +L+L+RV VG +   P  +R
Sbjct:   96 YGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRR 161
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BLAST of mRNA_C-tenellus_contig7793.2.1 vs. uniprot
Match: A0A6H5L4Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y3_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.560e-16
Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:    4 YGLGKRVPRKQVAEIMKYVRDQTQELDIEEKRWFSSVGIVCMVFGVLLLLMRVAVGDLRTNPTPQR 69
            YGLG++VPR +VA IM+YV+ Q  +LD++E RWF+ +GIVC VFG +L+L+RV VG +   P  +R
Sbjct:  144 YGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRR 209
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BLAST of mRNA_C-tenellus_contig7793.2.1 vs. uniprot
Match: A0A835YLB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.320e-15
Identity = 33/64 (51.56%), Postives = 50/64 (78.12%), Query Frame = 0 
Query:    1 MTKYGLGKRVPRKQVAEIMKYVRDQTQELDIEEKRWFSSVGIVCMVFGVLLLLMRVAVGDLRTN 64
            M+  GLG++VPR +V EIMKY++ +  E+D+ + R+ S VG++C +FGVLLLLMR AVG+L ++
Sbjct:  116 MSSRGLGRQVPRSRVQEIMKYIKREIHEVDVSQARYTSGVGLICCIFGVLLLLMRAAVGNLSSS 179
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7793.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT18_ECTSI5.910e-1753.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4Y3_9PHAE1.560e-1653.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLB3_9STRA5.320e-1551.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7793contigC-tenellus_contig7793:2941..3424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7793.2.1mRNA_C-tenellus_contig7793.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7793 1829..4080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7793.2.1 ID=prot_C-tenellus_contig7793.2.1|Name=mRNA_C-tenellus_contig7793.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=80bp
MTKYGLGKRVPRKQVAEIMKYVRDQTQELDIEEKRWFSSVGIVCMVFGVL
LLLMRVAVGDLRTNPTPQRTRRAVRRQPR*
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