prot_C-tenellus_contig7771.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7771.2.1
Unique Nameprot_C-tenellus_contig7771.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length71
Homology
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BLAST of mRNA_C-tenellus_contig7771.2.1 vs. uniprot
Match: D8LJ92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ92_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 7.750e-21
Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:    1 KRFLTSEAATRRRLATALSARTIKITPDILSGLLFLLLFLFVLVTGLGCLGDIECPQSFATVQPAAGKEY 70
            +R L +E+   RRLAT    RTIKITPDIL+GLL LLLFLF+LVTGLGC+GDIECP+SF++  PA G+EY
Sbjct:  228 RRSLKAESRAHRRLATESLTRTIKITPDILAGLLTLLLFLFILVTGLGCVGDIECPKSFSSEDPAKGREY 297
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BLAST of mRNA_C-tenellus_contig7771.2.1 vs. uniprot
Match: A0A7S2WS17_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS17_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 6.390e-7
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0 
Query:   12 RRLATALSARTIKITPDILSGLLFLLLFLFVLVTGLGCLGDIECPQSFATVQPAAGKEY 70
            RRL++A S + +++TPDIL+GLL  +L   + +TGL CLG I+ P  F+ V P + +EY
Sbjct:  210 RRLSSASSTQGVRMTPDILAGLLTGILLTVIALTGLCCLGSIQTPTKFSDVPPPSTREY 268
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7771.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ92_ECTSI7.750e-2167.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2WS17_9STRA6.390e-745.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7771contigC-tenellus_contig7771:6282..6494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7771.2.1mRNA_C-tenellus_contig7771.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7771 6282..6494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7771.2.1 ID=prot_C-tenellus_contig7771.2.1|Name=mRNA_C-tenellus_contig7771.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=71bp
KRFLTSEAATRRRLATALSARTIKITPDILSGLLFLLLFLFVLVTGLGCL
GDIECPQSFATVQPAAGKEY*
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