prot_C-tenellus_contig7703.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7703.2.1
Unique Nameprot_C-tenellus_contig7703.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length138
Homology
BLAST of mRNA_C-tenellus_contig7703.2.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 5.330e-28
Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = 0
Query:    6 FENDNLATVTR-VDIGTLDCDSLRLAESASELQFTISSTEDVLVLQASFEVLSENIFTDGKSRKVWMGTIVNTTAENITTYPRMFSMTWTDDCDVETFLLKIITPTSAGYTSIIKSVPCAAGGDKDICIIEV 136
             E D L  V   +++G L CDSL  A  +S L+FTISSTE V+  + S+  +  N+  DG +RK W+G +V+    +  + PR  SMTWTD CD+ETFLLK+++  S G TSI  SVPC+AG   +IC++E+
Sbjct:  159 LETDELTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDP-EPSTNSIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPCSAGSSSEICMVEL 289          
BLAST of mRNA_C-tenellus_contig7703.2.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.100e-27
Identity = 57/134 (42.54%), Postives = 88/134 (65.67%), Query Frame = 0
Query:    4 SSFENDNLATVT-RVDIGTLDCDSLRLAESASELQFTISSTEDVLVLQASFEVLSENIFTDGKSRKVWMGTIVNTTAENITTYPRMFSMTWTDDCDVETFLLKIITPTSAGYTSIIKSVPCAAGGDKDICIIEV 136
            ++ E+D  ATV   + +G L CDSL  A  ++ L+F ISSTE V+  + S+  +  NIF DG++RK WMG +V+       + PR  SMTWT+ C VE+FLL +++  + G TSI++S+PCAAG   ++C++E+
Sbjct:   69 AALESDPQATVVVHIGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGNIFPDGETRKTWMGEVVDPEPP-AGSAPRTVSMTWTNPCGVESFLLTVVSHNNDGSTSIVRSIPCAAGSSSEVCMVEL 201          
BLAST of mRNA_C-tenellus_contig7703.2.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 4.620e-13
Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   42 STEDVLVLQASFEVLSENIFTDGKSRK-------------VWMGTIVNTTAENITTYPRMFSMTWTDDCDVETFLLKIITPTSAGYTSIIKSVPCAAGGDKDICIIEV 136
            +++ V+  + S+  +  ++ +DG +RK              W+G +V+    +  + PR  SMTWTD CD E+FLLK+++  + G TSI  SVPC+AG   +IC++E+
Sbjct:    5 TSQTVIAERTSYSSIDGSVLSDGITRKDELTGDGSHGLFQTWLGEVVDP-EPSANSIPRTVSMTWTDPCDTESFLLKLVSRNADGSTSIFTSVPCSAGSSNEICMVEL 111          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7703.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JF50_9PHAE5.330e-2845.45LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LLU0_ECTSI5.100e-2742.54PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JRC1_9PHAE4.620e-1334.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7703contigC-tenellus_contig7703:3188..5789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7703.2.1mRNA_C-tenellus_contig7703.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7703 3188..5789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7703.2.1 ID=prot_C-tenellus_contig7703.2.1|Name=mRNA_C-tenellus_contig7703.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=138bp
DVRSSFENDNLATVTRVDIGTLDCDSLRLAESASELQFTISSTEDVLVLQ
ASFEVLSENIFTDGKSRKVWMGTIVNTTAENITTYPRMFSMTWTDDCDVE
TFLLKIITPTSAGYTSIIKSVPCAAGGDKDICIIEVG*
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