prot_C-tenellus_contig7694.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7694.1.1
Unique Nameprot_C-tenellus_contig7694.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length105
Homology
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BLAST of mRNA_C-tenellus_contig7694.1.1 vs. uniprot
Match: A0A6H5KY01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY01_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.700e-22
Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 0 
Query:   25 DFGVMSCYRGFVISCMEDDWLTDTLSDDEVGLPEGHDLAMDDGEVDLGESMDAMEKEENKWTELGIDAL-QREGQAPSSSS 104
            DFG +S Y GF +   ++ W T  LSDDE+ LPEGHD+ +DDGEVDLGES++A E+EE KWT+ GID L QREG AP++++
Sbjct:    5 DFGAVSLYAGF-LDITDEAWTTADLSDDEIDLPEGHDVVVDDGEVDLGESIEAAEQEELKWTDKGIDLLLQREGGAPTANT 84
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BLAST of mRNA_C-tenellus_contig7694.1.1 vs. uniprot
Match: A0A0P1AZ02_PLAHL (Apc13p n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZ02_PLAHL)

HSP 1 Score: 48.1 bits (113), Expect = 3.470e-5
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:   33 RGFVISCMEDDWLTDTLSDDEVGLPEGHDLAMDDGEVDLGE-SMDAMEKEENKWTELGID 91
            R   +  ++DDW+ DTLSDDE+ +P   D+ ++  E   GE SM   E+++++W +LG+D
Sbjct:   11 RKLFLDIVDDDWIKDTLSDDEIEIPLALDVDLNGSESPTGEPSMWTAEEKKDRWNDLGLD 70
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7694.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY01_9PHAE1.700e-2258.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1AZ02_PLAHL3.470e-538.33Apc13p n=1 Tax=Plasmopara halstedii TaxID=4781 Rep... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7694contigC-tenellus_contig7694:2824..6318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7694.1.1mRNA_C-tenellus_contig7694.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7694 86..6359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7694.1.1 ID=prot_C-tenellus_contig7694.1.1|Name=mRNA_C-tenellus_contig7694.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=105bp
MRGVDWLTSEEQVWDSDYGSVKRVDFGVMSCYRGFVISCMEDDWLTDTLS
DDEVGLPEGHDLAMDDGEVDLGESMDAMEKEENKWTELGIDALQREGQAP
SSSS*
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