prot_C-tenellus_contig7642.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7642.2.1
Unique Nameprot_C-tenellus_contig7642.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length95
Homology
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BLAST of mRNA_C-tenellus_contig7642.2.1 vs. uniprot
Match: A0A6H5J951_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J951_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 3.210e-5
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:    1 MTRKGKKERRNLEKEADRLETIADVGNAVDFVRVAREA 38
            +TRK KK R  +EK+A RLETIADVG+A DF+RVA+ A
Sbjct:  391 VTRKAKKARARMEKDAGRLETIADVGSAADFIRVAKNA 428
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7642.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J951_9PHAE3.210e-565.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7642contigC-tenellus_contig7642:1728..3581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7642.2.1mRNA_C-tenellus_contig7642.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7642 1324..5345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7642.2.1 ID=prot_C-tenellus_contig7642.2.1|Name=mRNA_C-tenellus_contig7642.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=95bp
MTRKGKKERRNLEKEADRLETIADVGNAVDFVRVAREAGEIPTGKYISQD
RGNLGGRRKKRGSGGAGGALELAMGAVGQSMSISSSGKKKSRLK*
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