prot_C-tenellus_contig763.1.3 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig763.1.3
Unique Nameprot_C-tenellus_contig763.1.3
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length299
Homology
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Match: D8LFP8_ECTSI (Similar to peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFP8_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.360e-66
Identity = 113/202 (55.94%), Postives = 146/202 (72.28%), Query Frame = 0
Query:    2 RLAARVERHLPCNRPSTVREFGAMMDKVVGNILASPTDPKFRELRALNKTVLRSIINCHGGREMLHLLGFERISKYGEPVYFLSDPQVDHLTEARVWLAQRVEGCLSMATQRSAPTGGGNDSCADCVITVKLTSGRVLEGGFFAHETIKNVYEFLHASVVNSSEDLRLCHGSPPQ-QLGEDMLGVTLKETNFMPTATLEVVK 202
            RL  RV RHLPCN    V +F  +  KVV NIL++P D KFRELRA NKT+ R++++CHGGRE L LLGFE+I+K GE VYFL++P VDHLT+A+ WLA+RV+ C     ++S  + GG  +CAD V+TV LTSG+ LEGGF+ HETI +VY FL +SVVN  EDLRL   + P+ +LGE ML ++L +   +P ATL VVK
Sbjct:   12 RLVNRVGRHLPCNTIQVVSDFAKVATKVVENILSNPADVKFRELRANNKTIQRAVLSCHGGREFLSLLGFEKITKNGEVVYFLAEPHVDHLTQAKGWLAERVKSC-----EQSEGSVGGR-ACADSVLTVLLTSGQTLEGGFYKHETIHDVYAFLQSSVVNGGEDLRLRTTTVPETELGEQMLPMSLADAKLLPRATLAVVK 207          
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Match: A0A835ZG04_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG04_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.990e-57
Identity = 106/261 (40.61%), Postives = 160/261 (61.30%), Query Frame = 0
Query:    2 RLAARVERHLPCNRPSTVREFGAMMDKVVGNILASPTDPKFRELRALNKTVLRSIINCHGGREMLHLLGFERISKYGEPVYFLSDPQVDHLTEARVWLAQRVEGCLSMATQRSAPTGGGNDSCADCVITVKLTSGRVLEGGFFAHETIKNVYEFLHASVVNSSEDLRLCHGSPPQQLGEDMLGVTLKETNFMPTATLEVVKTK-----SLQALGKAVPGAVDEATKAAEDLNMLMRHRDTTRREKEKEKAKLVAEFLADHE 257
            RL  RV RH+PCN P  VR F     K++ NI+ +P +PK+RELRA N  V   ++  HGG+E LHLLGFE+I K+GE VYF+++  +++LT+A+ WL Q+    ++MA         G  +CA+CVI V+LTSG+ LEGGF+AHET++ VY+F+ +SVVN+ E L L           D L +TL++    P A L+VVK+      + +A+ +A   A  +  +A E L M+   +   +  ++ EKA++++EF  D E
Sbjct:   12 RLLVRVGRHIPCNAPEAVRVFLDAASKMLDNIMKAPEEPKYRELRAANAAVSAKLLQPHGGKEFLHLLGFEKIFKHGEAVYFMTEVDLEYLTQAKQWLQQQAAAAMAMAPAEVP----GAQACAECVIQVRLTSGQTLEGGFYAHETVRAVYDFVRSSVVNAEEAL-LLRAPGHHSFTADKLDMTLQDAGLAPRAVLQVVKSGPEEGGAAEAMEEARRRARQQEREAHEQLRMIKETKMKEQVARDAEKARILSEFKHDRE 267          
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Match: A0A7S3TPZ0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TPZ0_9SPIT)

HSP 1 Score: 56.6 bits (135), Expect = 2.790e-6
Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   24 AMMDKVVGNILASPTDPKFRELRALNKTVLRSIINCHGGREMLHLLGFE 72
            A + K++ N+L+SPT+PK+R L+A NK V   I++C GGR++L   GFE
Sbjct:   57 ATIIKIIANVLSSPTEPKYRALKAENKAVKEKILSCPGGRQLLLAAGFE 105          
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Match: A0A0H5RB26_9EUKA (PUB domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RB26_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 9.290e-5
Identity = 29/91 (31.87%), Postives = 48/91 (52.75%), Query Frame = 0
Query:   11 LPCNRPSTVREFGAMMDKVVGNILASPTDPKFRELRALNKTVLRSIINCHGGREMLHLLGFER---ISKYGEPVYFLSDPQVDHLTEARVW 98
            L C+        GA++D +VGNI++SP DP FR +R  N+ +   +++  GG E L  +GF          E  +++++P VD+  E   W
Sbjct:  217 LTCSPKQLRCAVGALLD-IVGNIISSPEDPTFRNIRKANEKLNGDLLSVDGGLEALICIGFREKNPTQTINEAHFYIAEPPVDNFDEWSSW 306          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig763.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LFP8_ECTSI1.360e-6655.94Similar to peptide-N(4)-(N-acetyl-beta-glucosaminy... [more]
A0A835ZG04_9STRA1.990e-5740.61UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3TPZ0_9SPIT2.790e-648.98Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A0H5RB26_9EUKA9.290e-531.87PUB domain-containing protein n=1 Tax=Spongospora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainPFAMPF09409PUBcoord: 24..94
e-value: 2.4E-12
score: 46.6
NoneNo IPR availableGENE3D1.20.58.2190coord: 4..102
e-value: 2.4E-14
score: 54.8
NoneNo IPR availableGENE3D3.10.20.90coord: 120..202
e-value: 7.6E-10
score: 40.7
NoneNo IPR availablePANTHERPTHR23153UBX-RELATEDcoord: 13..96
NoneNo IPR availableCDDcd09212PUBcoord: 25..101
e-value: 8.59916E-14
score: 63.9404
IPR001012UBX domainPFAMPF00789UBXcoord: 126..198
e-value: 2.3E-5
score: 24.5
IPR001012UBX domainPROSITEPS50033UBXcoord: 122..200
score: 10.863
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 6..104
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 114..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig763contigC-tenellus_contig763:1783..14586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig763.1.3mRNA_C-tenellus_contig763.1.3Choristocarpus tenellus KU2346mRNAC-tenellus_contig763 88..14587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig763.1.3 ID=prot_C-tenellus_contig763.1.3|Name=mRNA_C-tenellus_contig763.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=299bp
MRLAARVERHLPCNRPSTVREFGAMMDKVVGNILASPTDPKFRELRALNK
TVLRSIINCHGGREMLHLLGFERISKYGEPVYFLSDPQVDHLTEARVWLA
QRVEGCLSMATQRSAPTGGGNDSCADCVITVKLTSGRVLEGGFFAHETIK
NVYEFLHASVVNSSEDLRLCHGSPPQQLGEDMLGVTLKETNFMPTATLEV
VKTKSLQALGKAVPGAVDEATKAAEDLNMLMRHRDTTRREKEKEKAKLVA
EFLADHEGKVANTHPSRHATRYGVNDDIGGYEGEGSGFFYCLHCKVVH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR001012UBX_dom
IPR036339PUB-like_dom_sf
IPR029071Ubiquitin-like_domsf