prot_C-tenellus_contig7624.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7624.2.1
Unique Nameprot_C-tenellus_contig7624.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length137
Homology
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: D8LQ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ11_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.700e-55
Identity = 92/129 (71.32%), Postives = 110/129 (85.27%), Query Frame = 0
Query:    8 VDLGSFRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPEQEPPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDLR 136
            VDL SFRCDPELS LL+ +GV  TL+ RLAQ  ++EGFMAEL DV+EKVLRS P+Q+PPPAEFY+RLVSEIDAVGW+HLVSMDS+LT++QLR RD AGREHV A+S+PS+YP +PP C  DLP  L+LR
Sbjct:   40 VDLASFRCDPELSALLEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLTSVQLRERDAAGREHVFAISLPSNYPHSPPICSVDLPTHLNLR 168          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: A0A835YLD4_9STRA (WD-repeat region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD4_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.470e-37
Identity = 67/136 (49.26%), Postives = 92/136 (67.65%), Query Frame = 0
Query:    1 MDGPGTAVDLGSFRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPEQEPPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDLR 136
            +  PG  VD  +F CD ELSQ+L   G    L+ RLAQ  +   F+AEL+DV++++LR++P+  P PA +Y+RLV+EID VGW HLV++   L+ LQLR  D AGR HV+ +++P DYP T P C ADLP P  L+
Sbjct:   44 LKSPGGQVDAEAFACDAELSQILTSAGALPALRLRLAQTPDPASFVAELQDVLQRLLRAAPQSAPAPAAYYSRLVAEIDKVGWEHLVTISERLSHLQLRVSDAAGRHHVIGVTMPPDYPRTAPTCVADLPAPFALQ 179          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: A0A2R6WJG8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WJG8_MARPO)

HSP 1 Score: 99.8 bits (247), Expect = 3.280e-22
Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 0
Query:   13 FRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPEQEPPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDLR 136
              C+ EL  +L  +GV   +Q RL Q  +L  F+ ELKD++E+++R+ P    P   FY++L + +D+VGW HL+ +   L++L LR  D AGREH++ + +P  +P   P   A+LP P+DLR
Sbjct:   45 LECNEELRTIL--RGVEPVVQERLKQSYDLSTFVLELKDILERIVRTQPFVSLPTPAFYSQLCANLDSVGWEHLIWLSDELSSLHLRIFDSAGREHIVLVDLPPGFPEVAPTASANLPIPVDLR 166          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: A0A2P6NXE8_9EUKA (E3 ubiquitin-protein ligase FANCL n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXE8_9EUKA)

HSP 1 Score: 96.7 bits (239), Expect = 3.200e-21
Identity = 58/131 (44.27%), Postives = 75/131 (57.25%), Query Frame = 0
Query:    2 DGPGTAVDLGSFRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPEQE-PPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPK 131
            +GP    D     C  ELS LL  KG+      RL Q  NL  F+ ELKD+V+ +L S  E+   PPAEFY+RL+ E+D +GW  LV +D  LT +QL   D   R H++ L+IP +YP  PP    DLPK
Sbjct:   39 NGPQNLKD-AELSCGEELSTLL--KGME---DKRLNQSKNLTSFLMELKDLVQGLLISEEEKTFKPPAEFYSRLMMEMDTIGWNRLVHIDKTLTNIQLNTYDSRNRNHIVQLTIPKNYPSYPPQVTFDLPK 163          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: H2S4L6_TAKRU (RING-type domain-containing protein n=3 Tax=Takifugu TaxID=31032 RepID=H2S4L6_TAKRU)

HSP 1 Score: 96.3 bits (238), Expect = 6.360e-21
Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 0
Query:    4 PGTAVDLGSFRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPE-QEPPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPL 133
            P   +  G   C  +L  LL  +G  +T++ RL Q  NL  F+ ELK ++E  L+S PE Q  PP ++Y++L+SE++ +GW+ L+ +D+    LQL A D +GR+H+L + +   +P   P C ADLP PL
Sbjct:   46 PDRKITGGRLHCCWQLKHLL--RGYEQTVKQRLQQSDNLVTFILELKTILEVGLKSFPEHQSIPPPQYYSQLISEMETLGWSKLLFIDTAFQTLQLNAEDSSGRQHLLTVKLKPKHPAEAPDCSADLPLPL 174          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: UPI00188991F3 (E3 ubiquitin-protein ligase FANCL isoform X3 n=2 Tax=Pungitius pungitius TaxID=134920 RepID=UPI00188991F3)

HSP 1 Score: 94.7 bits (234), Expect = 1.920e-20
Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   13 FRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPEQEP-PPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDL 135
              C  +L  LLQ  G    ++ RL Q  +L  F+ ELK V+E  L+S PE+   PP ++YTRL+SE++ +GW  L+ +D+    L+L+A D +GR+HVL + + + +P   P C ADLP PL L
Sbjct:   50 LHCCWQLKHLLQ--GYEHIVKQRLQQSADLVTFVLELKTVLEVCLKSCPERRSIPPPQYYTRLISEMETLGWGRLLFIDTEFRMLRLKAEDSSGRQHVLTVKLRAKHPAEAPECSADLPVPLAL 171          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: A0A6J2V969_CHACN (E3 ubiquitin-protein ligase FANCL n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2V969_CHACN)

HSP 1 Score: 94.7 bits (234), Expect = 2.200e-20
Identity = 49/132 (37.12%), Postives = 80/132 (60.61%), Query Frame = 0
Query:    5 GTAVDLGSFRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPE-QEPPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDL 135
            G+ +   +F C  EL +LL  +G  + ++ RL Q  +L  F+ ELK V E  L+  PE Q  PP ++Y+RL++E++A+GW  L+ +D+    L+L+  D +GR+H + + +  +YP   P C ADLP PL +
Sbjct:   43 GSQLKQATFHCCWELRRLL--RGYQQIVKQRLHQSPDLVSFILELKAVTEVALKHRPECQTIPPPQYYSRLITEMEALGWDKLLFIDTEFRTLKLKGEDSSGRQHAITVHLKPEYPAEAPECSADLPVPLTI 172          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: UPI00188946AC (E3 ubiquitin-protein ligase FANCL isoform X1 n=2 Tax=Pungitius pungitius TaxID=134920 RepID=UPI00188946AC)

HSP 1 Score: 94.7 bits (234), Expect = 2.580e-20
Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   13 FRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPEQEP-PPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDL 135
              C  +L  LLQ  G    ++ RL Q  +L  F+ ELK V+E  L+S PE+   PP ++YTRL+SE++ +GW  L+ +D+    L+L+A D +GR+HVL + + + +P   P C ADLP PL L
Sbjct:   50 LHCCWQLKHLLQ--GYEHIVKQRLQQSADLVTFVLELKTVLEVCLKSCPERRSIPPPQYYTRLISEMETLGWGRLLFIDTEFRMLRLKAEDSSGRQHVLTVKLRAKHPAEAPECSADLPVPLAL 171          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: UPI00112EEF00 (E3 ubiquitin-protein ligase FANCL isoform X1 n=3 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112EEF00)

HSP 1 Score: 94.0 bits (232), Expect = 4.400e-20
Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 0
Query:   13 FRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPE-QEPPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDL 135
             +C   L  +L   G  + ++ RL    +L  FM ELK ++E  L++  E   PPP ++Y+ LV +I+ +GW  LV +D+ L+ ++L+  D AGREH++ L + ++YPL PP CF D P P ++
Sbjct:   52 LQCSVHLKNVLH--GYHQIVKQRLQHSCDLGSFMLELKTILEAALKNKRELNAPPPPQYYSCLVKDIENLGWDKLVFVDTELSTIRLKVEDSAGREHLITLHLKANYPLEPPDCFVDFPVPFEI 173          
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Match: H3D7A8_TETNG (FA complementation group L n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3D7A8_TETNG)

HSP 1 Score: 93.6 bits (231), Expect = 6.400e-20
Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = 0
Query:    4 PGTAVDLGSFRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELKDVVEKVLRSSPEQEP-PPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRARDKAGREHVLALSIPSDYPLTPPACFADLPKPLDLR 136
            P   +  G   C  +L  LL  +G  +T++ RL Q  +L  F+ ELK ++E  L+S PE+   PP ++Y++L+SE++ +GW+ L+ +D+    L+L A D +GR+H+L + + S +P   P C ADLP PL L 
Sbjct:   44 PDGQLSGGRLHCCWQLKHLL--RGYEQTVKQRLQQSEDLVTFILELKTILEVGLKSFPERRSIPPPQYYSQLISEMETLGWSKLLFIDTAFQTLKLDAEDSSGRQHILTVKLKSKHPFEAPDCSADLPIPLLLN 175          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7624.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ11_ECTSI1.700e-5571.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLD4_9STRA1.470e-3749.26WD-repeat region-domain-containing protein n=1 Tax... [more]
A0A2R6WJG8_MARPO3.280e-2239.52Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A2P6NXE8_9EUKA3.200e-2144.27E3 ubiquitin-protein ligase FANCL n=1 Tax=Planopro... [more]
H2S4L6_TAKRU6.360e-2138.93RING-type domain-containing protein n=3 Tax=Takifu... [more]
UPI00188991F31.920e-2041.13E3 ubiquitin-protein ligase FANCL isoform X3 n=2 T... [more]
A0A6J2V969_CHACN2.200e-2037.12E3 ubiquitin-protein ligase FANCL n=1 Tax=Chanos c... [more]
UPI00188946AC2.580e-2041.13E3 ubiquitin-protein ligase FANCL isoform X1 n=2 T... [more]
UPI00112EEF004.400e-2037.10E3 ubiquitin-protein ligase FANCL isoform X1 n=3 T... [more]
H3D7A8_TETNG6.400e-2037.31FA complementation group L n=2 Tax=Tetraodon nigro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043898FANCL, UBC-like domain 2PFAMPF18890FANCL_d2coord: 69..135
e-value: 7.2E-18
score: 64.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 69..136
e-value: 6.6E-23
score: 82.7
IPR026848E3 ubiquitin-protein ligase FANCLPANTHERPTHR13206UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEINcoord: 15..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7624contigC-tenellus_contig7624:2554..3760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7624.2.1mRNA_C-tenellus_contig7624.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7624 2474..6264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7624.2.1 ID=prot_C-tenellus_contig7624.2.1|Name=mRNA_C-tenellus_contig7624.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=137bp
MDGPGTAVDLGSFRCDPELSQLLQEKGVARTLQPRLAQVGNLEGFMAELK
DVVEKVLRSSPEQEPPPAEFYTRLVSEIDAVGWTHLVSMDSMLTALQLRA
RDKAGREHVLALSIPSDYPLTPPACFADLPKPLDLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043898FANCL_d2
IPR016135UBQ-conjugating_enzyme/RWD
IPR026848Fancl