prot_C-tenellus_contig76.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig76.5.1
Unique Nameprot_C-tenellus_contig76.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length126
Homology
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 9.420e-72
Identity = 116/124 (93.55%), Postives = 121/124 (97.58%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSAKK 124
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG+VTIASGGVLPNIHAVLLPKK+ KK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 3.230e-70
Identity = 115/123 (93.50%), Postives = 120/123 (97.56%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSAK 123
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG+VTIASGGVLPNIHAVLLPKK+ K
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 3.260e-68
Identity = 110/122 (90.16%), Postives = 119/122 (97.54%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSA 122
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK+GKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG+VTIASGGVLPNIHAVLLPKKS+
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS 120
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.230e-67
Identity = 110/123 (89.43%), Postives = 117/123 (95.12%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSAK 123
            MSGKGKGGRG  KKSTT SAKAGLQFPVGR+GR+L+QGKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKKSAK
Sbjct:    1 MSGKGKGGRGG-KKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 1.680e-67
Identity = 110/122 (90.16%), Postives = 119/122 (97.54%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSA 122
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK+GKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG+VTIASGGVLPNIHAVLLPKKS+
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS 171
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.490e-67
Identity = 108/123 (87.80%), Postives = 117/123 (95.12%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSAK 123
            MSGKGKGGRG+ KKSTT SAKAGLQFPVGR+GR+L+QGKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKKS K
Sbjct:    1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSGK 122
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 4.560e-67
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KK T+RSAKAGLQFPVGR+GRF+KQGKY++RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLGD TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: A0A1E7EZ55_9STRA (Histone H2A n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7EZ55_9STRA)

HSP 1 Score: 205 bits (522), Expect = 3.120e-66
Identity = 107/127 (84.25%), Postives = 117/127 (92.13%), Query Frame = 0 
Query:    1 MSGKGK--GGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSAKKA 125
            MSGKGK  GGRG+ K STT SAKAGLQFPVGR+GR+L+QGKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLGDVTIA GGVLPNIHAVLLPKKS K +
Sbjct:    1 MSGKGKXXGGRGEKKVSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHITLAVKNDEELNKLLGDVTIAQGGVLPNIHAVLLPKKSQKSS 127
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: A0A6U3UCP9_9STRA (Histone H2A n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UCP9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.940e-66
Identity = 108/123 (87.80%), Postives = 117/123 (95.12%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSAK 123
            MSGKGK GRG+ KKSTT SAKAGLQFPVGR+GR+L+QGKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKKS+K
Sbjct:   28 MSGKGKEGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSSK 149
[Close]
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 204 bits (520), Expect = 6.100e-66
Identity = 107/124 (86.29%), Postives = 115/124 (92.74%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGDVTIASGGVLPNIHAVLLPKKSAKK 124
            MSG+GKG     KK+ +RSAKAGLQFPVGRV R+LK+GKYATR+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLGDVTIASGGVLPNIH+VLLPKKS KK
Sbjct:    1 MSGRGKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig76.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI9.420e-7293.55Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI3.230e-7093.50Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE3.260e-6890.16Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6U2JFS4_9STRA1.230e-6789.43Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
D7FVQ5_ECTSI1.680e-6790.16Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A448ZH28_9STRA2.490e-6787.80Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
D8LLP0_ECTSI4.560e-6790.00Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A1E7EZ55_9STRA3.120e-6684.25Histone H2A n=3 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A6U3UCP9_9STRA4.940e-6687.80Histone H2A n=1 Tax=Ditylum brightwellii TaxID=492... [more]
A0A061QUG5_9CHLO6.100e-6686.29Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 14..36
score: 68.99
coord: 100..118
score: 76.19
coord: 43..58
score: 90.36
coord: 58..71
score: 90.54
coord: 72..86
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 1.4E-80
score: 283.6
IPR002119Histone H2ACDDcd00074H2Acoord: 6..120
e-value: 8.45257E-70
score: 202.95
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..125
e-value: 5.0E-21
score: 74.2
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..125
e-value: 1.4E-65
score: 220.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 5..124
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..89
e-value: 8.5E-16
score: 58.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR23430:SF286HISTONE H2A.6coord: 3..123
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 3..123
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig76contigC-tenellus_contig76:18515..18892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig76.5.1mRNA_C-tenellus_contig76.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig76 18515..18892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig76.5.1 ID=prot_C-tenellus_contig76.5.1|Name=mRNA_C-tenellus_contig76.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=126bp
MSGKGKGGRGDSKKSTTRSAKAGLQFPVGRVGRFLKQGKYATRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGD
VTIASGGVLPNIHAVLLPKKSAKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS