prot_C-tenellus_contig76.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig76.3.1
Unique Nameprot_C-tenellus_contig76.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length207
Homology
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BLAST of mRNA_C-tenellus_contig76.3.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 5.480e-35
Identity = 86/213 (40.38%), Postives = 134/213 (62.91%), Query Frame = 0 
Query:    1 MGVLRKILKKFKGGEWGKARQKFKDDFDLDDNLRTLFSKIDNTTKRNIL--LKFGDQHQKSILQGQEQGDVVHPNVVAPRDGVEVELASE---DKDRSPKMYARELV-MSSIPKIKILEALRVSIKAADDEWIKTFKENDGMAGIYKVMAEVGECREDYLE-EGDDDNERVVPQEDIELEEELVHCLMLLMNKPVGLTMLGESTDLMPLLAVS 206
            MG L K L++       + R        LDD+LR L  K+ N+TKRN++  L  G+     +L  Q +G +       P+    +E AS    +K++S K +A  L+ +  +P++K ++ L  ++K AD++W+ +F++N G+AGIYK MAE+ + REDYL+ +GDDDN+  VP+E+++LEEELV C+M+L+NKP GL  L  S+DL+PLLA S
Sbjct:    1 MGFLNKYLRRTSKKTTSEER--------LDDDLRQLLKKLPNSTKRNLIQDLSNGEGGSSRVLSAQARG-LKDRRASEPQFAAIMEAASTVVAEKEKSAKDFADSLMEVEDLPELKEIKELHRALKKADEDWVASFRDNGGVAGIYKAMAELAQSREDYLDNDGDDDNDHEVPEEEVKLEEELVRCVMILLNKPQGLMTLEASSDLLPLLARS 204
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig76.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPH1_ECTSI5.480e-3540.38Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010473Formin, GTPase-binding domainSMARTSM01140Drf_GBD_2coord: 8..205
e-value: 0.0024
score: 13.6
IPR010473Formin, GTPase-binding domainPFAMPF06371Drf_GBDcoord: 28..204
e-value: 9.6E-14
score: 51.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 22..206
e-value: 7.7E-13
score: 50.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 22..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig76contigC-tenellus_contig76:10139..14293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig76.3.1mRNA_C-tenellus_contig76.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig76 9741..14373 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig76.3.1 ID=prot_C-tenellus_contig76.3.1|Name=mRNA_C-tenellus_contig76.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=207bp
MGVLRKILKKFKGGEWGKARQKFKDDFDLDDNLRTLFSKIDNTTKRNILL
KFGDQHQKSILQGQEQGDVVHPNVVAPRDGVEVELASEDKDRSPKMYARE
LVMSSIPKIKILEALRVSIKAADDEWIKTFKENDGMAGIYKVMAEVGECR
EDYLEEGDDDNERVVPQEDIELEEELVHCLMLLMNKPVGLTMLGESTDLM
PLLAVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010473GTPase-bd
IPR011989ARM-like
IPR016024ARM-type_fold