prot_C-tenellus_contig7595.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7595.1.1
Unique Nameprot_C-tenellus_contig7595.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length455
Homology
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BLAST of mRNA_C-tenellus_contig7595.1.1 vs. uniprot
Match: D8LM26_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM26_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 7.550e-71
Identity = 183/460 (39.78%), Postives = 222/460 (48.26%), Query Frame = 0 
Query:    1 RPPPKATAPVYNVSVTRWRFVDANGVPCSHGGPAISDNWTEVSSLADTSSRAATISRSEIDATPLLPTPSHTLPNMSAAVKPWCPSPLDMRGTSGALEGGAHGVGSMNQGPLGVQFELAVHASGQGEMDWWGHGSAVVEHQSPSLNIFPFGGGSGGSMRIRGGGLNGEWRVWRSGSDALTLYDSLALQFGQDFCIRVKRPLLRTVRHSAAEGVAGV------------SGPDPSNLLVQTAPVPHRSDTSHDAKSLGAFLRHLLGQRQFLSTEIREFLGHRQVQHAPLDLPSSHFSSGDSDFTTATSVEDGVSEVNSDVDDRGSKCSGDNPDNSGLSTTKLQLEADDRRLGKNGEVVHSWGRPGGGGSV----EAVAAAALATDYTAWLTRLAVRLRRAVPAGECFVRLRCIDRAITGEQVVRWLVSSCGDCKGNRTEAVRLGSEMVSCGLLLPICAGYE 444
            R PP+  AP++ V+VTRWR VD +G P +HG  +    WT+ S                                 S+ V+      LD        +G   G       PLGVQFEL V ASG+GEMDWWG G +  E  SP           G +    G G  G+WRVWRS +D L LYD+LAL+FGQ+FC RV RP L+T   S+A G +GV            S PD    L+  +  PHR D   DAK++GAFLR LLG RQFLST + ++L     Q AP  LP+   S+       A S             D GS                                  S G+  GG       +AVA AALA+DY  WL RLAVRLRRA PAGE FVRLRCI  A+TGEQVVRWL+     C G+R  AVRLG +MVS  LL P+CAGY 
Sbjct:  412 RAPPRVAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RASSMVESRFNDHLDPSLALDPNDGARVGE------PLGVQFELVVRASGRGEMDWWGRGDSA-EPSSPGAGHIGIHPPHGPAPATPGTGA-GDWRVWRSAADTLALYDALALRFGQEFCGRVSRPKLKTTLPSSAAGASGVLSDDRSGSPPRPSSPDSPPALIVASAAPHRVDMLRDAKTVGAFLRSLLGLRQFLSTAVMDYL----AQPAPASLPADDLSANGGGGAEAGS-------------DHGSDGYFXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFSSGKADGGSGPSAAGQAVAGAALASDYGTWLKRLAVRLRRATPAGEQFVRLRCISPAVTGEQVVRWLMRE-KVCNGDRASAVRLGQDMVSHRLLAPVCAGYH 844
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7595.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM26_ECTSI7.550e-7139.78PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 373..453
e-value: 9.1E-6
score: 27.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..327
NoneNo IPR availableCDDcd04371DEPcoord: 375..439
e-value: 1.30647E-5
score: 41.1721
IPR000591DEP domainPROSITEPS50186DEPcoord: 396..439
score: 8.66
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 385..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7595contigC-tenellus_contig7595:179..2198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7595.1.1mRNA_C-tenellus_contig7595.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7595 179..2198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7595.1.1 ID=prot_C-tenellus_contig7595.1.1|Name=mRNA_C-tenellus_contig7595.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=455bp
RPPPKATAPVYNVSVTRWRFVDANGVPCSHGGPAISDNWTEVSSLADTSS
RAATISRSEIDATPLLPTPSHTLPNMSAAVKPWCPSPLDMRGTSGALEGG
AHGVGSMNQGPLGVQFELAVHASGQGEMDWWGHGSAVVEHQSPSLNIFPF
GGGSGGSMRIRGGGLNGEWRVWRSGSDALTLYDSLALQFGQDFCIRVKRP
LLRTVRHSAAEGVAGVSGPDPSNLLVQTAPVPHRSDTSHDAKSLGAFLRH
LLGQRQFLSTEIREFLGHRQVQHAPLDLPSSHFSSGDSDFTTATSVEDGV
SEVNSDVDDRGSKCSGDNPDNSGLSTTKLQLEADDRRLGKNGEVVHSWGR
PGGGGSVEAVAAAALATDYTAWLTRLAVRLRRAVPAGECFVRLRCIDRAI
TGEQVVRWLVSSCGDCKGNRTEAVRLGSEMVSCGLLLPICAGYEGSNSGG
SNSNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR000591DEP_dom
IPR036390WH_DNA-bd_sf