prot_C-tenellus_contig756.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig756.1.1
Unique Name	prot_C-tenellus_contig756.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	1297

Homology

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BLAST of mRNA_C-tenellus_contig756.1.1 vs. uniprot
Match: D8LKG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG5_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 6.170e-12
Identity = 74/249 (29.72%), Postives = 101/249 (40.56%), Query Frame = 0

Query:    2 NPNLGELFLLFCLFV---------------------------EGFQSSTCVLGLNSDGERYTES-----VTPDRQWWGRPEEGPVLLLVNDKLLEDLALPAIAATLRRSCGAILYSLWPGRASGLPVWGNDPRWSLLGHALSGSXXXXXXXXXSGLGTDSHHKMDKSQGL-CYLEWMDILFEASHRNSSGDGGISSPGPFGLPGFLLPTIGSASATGGGLGRMGQKGDHYHRLEARHAFDVAAGRTVDV 217
            NPN+GE+FL FC +V                           E + S+   +     G++   S       P+    G+ +   + + V  K+LEDL   A+ + LRR+C AI  SL P  A GLPVWG D RWSLLG AL  S           +G        K +G   YL+WM+I  +        DG    PG +G            + TG    R     +    L+ +HA DV   RT DV
Sbjct:  339 NPNIGEIFLRFCSYVRQLGVKPGRRKSAGPPATMNLLDSGELEMWWSAAAAVAATPKGKKPQRSDRGAETEPEEIAMGQDQADLIRVQVGGKVLEDLVDAALVSGLRRACAAIEQSLTPDGARGLPVWGQDIRWSLLGFALEQSQGENDEESEGRVGK-------KKEGQPSYLDWMEIRLQMCMN----DGIDEMPGMYGF-----------NVTG----RAPLAPEAIANLDRQHAADVLQARTADV 561

[Close]

BLAST of mRNA_C-tenellus_contig756.1.1 vs. uniprot
Match: A0A6H5KUD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD4_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.600e-10
Identity = 64/184 (34.78%), Postives = 83/184 (45.11%), Query Frame = 0

Query:   58 VNDKLLEDLALPAIAATLRRSCGAILYSLWPGRASGLPVWGNDPRWSLLGHALSGSXXXXXXXXXSGLGTDSHHKMDKSQGL-CYLEWMDILFEASHRNSSGDGGISSPGPFGLPGFLLPTIGSASATGGGLGRMGQKGDHYHRLEARHAFDVAAGRTVDVAW-AELKAAAVGPGEKGGNAAEG 239
            V  K+LEDL   A+A+ LRR+C AI  SL P  A GLPVWG D RWSLLG A   S          G+G       +K +G   YL+WM+I  +        +G    PG +G            + TG    R     +    L+ +HA DV   RT DV + A L+      G+ G   A G
Sbjct:  238 VGGKVLEDLVDAALASDLRRACAAIEQSLTPDGARGLPVWGQDIRWSLLGFAFEQSEGENDEESEGGVG-------EKREGRPSYLDWMEIRLQMCMN----EGIDEMPGMYGF-----------NVTG----RAPLAPEAIANLDRQHAADVLQARTADVVFSAALQVGGGSQGQHGSGGANG 395

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig756.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig756.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LKG5_ECTSI	6.170e-12	29.72	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KUD4_9PHAE	3.600e-10	34.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 519..559
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 599..659
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1255..1296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1267..1281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 696..725
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1123..1214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 492..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 940..965
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1149..1168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1185..1214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 668..695
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 599..769
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1282..1296
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..1296

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig756	contig	C-tenellus_contig756:214..14056 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig756.1.1	mRNA_C-tenellus_contig756.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig756 122..15890 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig756.1.1 ID=prot_C-tenellus_contig756.1.1|Name=mRNA_C-tenellus_contig756.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=1297bp
MNPNLGELFLLFCLFVEGFQSSTCVLGLNSDGERYTESVTPDRQWWGRPE
EGPVLLLVNDKLLEDLALPAIAATLRRSCGAILYSLWPGRASGLPVWGND
PRWSLLGHALSGSGAGAAAAASSGLGTDSHHKMDKSQGLCYLEWMDILFE
ASHRNSSGDGGISSPGPFGLPGFLLPTIGSASATGGGLGRMGQKGDHYHR
LEARHAFDVAAGRTVDVAWAELKAAAVGPGEKGGNAAEGIVELRQWQQSA
MADTGDSFGTGSDGKGARSDGSLNSIPSSFVGEEAESVGEEGDVEMDIDC
EEDEHSDVEVKVNVGDDRVLEGVGECAGWAEQPPLPPGPMPPLPLQEGPP
EVIAAVNCGRDGDSKDNVGVSSVALASMTGVDVINAVQLPVLPPLPSSEP
DKSQEEDYMVDREACCSVVGGDRGEGVQEGSGLGAGSGPLQVPLVGNGES
CTSHQDKRMIKHNYKKSCGNAGDKTTACCTVGDTSDQDAVDNSGAEMERK
SELERGREKEREKGRERGRKLLELKAERERKETARAMEREREEEQREKDK
EQRARVRDRSREVTKTQERVERRVRDRERKEWDRQREWERERDRERDRWT
RFRQAKGRKEDDTKRRRAVMDTRDRRWERSPAPEREVRRKWIRSKDGRQE
SRRVDRGRGGQGWGESQRWGEGPNSGSSSSSTSSSSSSGSDSGSDKGSDS
ESKSNGGERDYRRDTLGEEDQLTSSSRKRVGAMGGVKGGGSGSGRGAVVG
TGAGVMQEGQEESEGKFSMKRIQERLKEIGSRGDSIKERLWEIAGGRGGD
EVWNVGDAQDVNKKEEEEEGEILEDRDAHLMSAPVMHHPGTSAYMASSIT
TYSAQPSSWMTSSPSVVELGVECASVTAPLAVNWTSDLPFREQSTTASAS
AMGHSQSTFQAQVPRPIVPHPTAYQVTAEGIDAARASTATHLTPTSTSMR
SISSYSAQPSGRTETQHSTLHATAKDVPVTPSTGSNWTVQLPLQSQVPDY
SACTIAPPTQDHISSRTPTTYQVATAVRGVLARATPGATFPWSAPPYSSR
TPGGMETIQPTTQSLVKGMAVTPQTAATWTLRGEIGDTKGVDPAGVGDVT
LVASCGPAGRGEGLFMEASAPEDGRERVRQSLLETCGLEQQGDSGDNAGE
GVKELEEGEIEEGEIKMTAPHPEGGTPHAPCLNAVSALGSSTQGPHGQTS
SVEKEQCSETEVAAHNEPSTAKACFPAIKLAQGEQYLGSLAVEEHANRSL
TLQTWTASVATTTTTGGKKQKKKKRKGVATKKSKKAEPSFPEIKEG*