prot_C-tenellus_contig7523.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig7523.2.1
Unique Name	prot_C-tenellus_contig7523.2.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	128

Homology

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BLAST of mRNA_C-tenellus_contig7523.2.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.060e-19
Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 0

Query:    7 ATSDAYLKTKYELVCKERDGLRQSLSVLERDNEELRKSVYELSYMLSMQGNSGNAALSLCGAGSPTAPSPNTTTAAVATG---QAPFEPRLGIGSHHHLDSLSLMSNGGIGGGM------VPRVLVPEAKL 128
            ++S+++ + +YE VCKERD L+ ++   ERD +EL+KSVYELSYMLSMQG++G+A  S   A  P A  P  +T    TG   +  F+PR+G+ + H LD+L LM+ GGIG G         RVLV EAKL
Sbjct:    8 SSSESFFRAQYESVCKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLA--PAAARPGASTGGNVTGPPSREVFDPRVGLATAH-LDALGLMNGGGIGVGSSGSGFAAGRVLVAEAKL 135

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BLAST of mRNA_C-tenellus_contig7523.2.1 vs. uniprot
Match: D7FIJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ7_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.350e-17
Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 0

Query:    7 ATSDAYLKTKYELVCKERDGLRQSLSVLERDNEELRKSVYELSYMLSMQGNSGNA----ALSLCGAGSPTAPSPNTTTAAVATGQAPFEPRLGIGSHHHLDSLSLMSNGGI----GGGMVP--RVLVPEAKL 128
            ++S+++ + +YE VCKERD L+ ++   ERD +EL+KSVYELSYMLSMQG++G+A    +L         A   N T       +  F+PR+GI + H LDSL LM+ GGI     G  +P  R+LV EAKL
Sbjct:    8 SSSESFFRAQYESVCKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLXXXXXXXXAATGGNVTGP---PSRKVFDPRVGIATAH-LDSLGLMNGGGIRVGSNGIRIPAGRILVAEAKL 135

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig7523.2.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig7523.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KNQ7_9PHAE	1.060e-19	47.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FIJ7_ECTSI	2.350e-17	44.70	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..44

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig7523	contig	C-tenellus_contig7523:3751..5117 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig7523.2.1	mRNA_C-tenellus_contig7523.2.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig7523 3751..5117 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig7523.2.1 ID=prot_C-tenellus_contig7523.2.1|Name=mRNA_C-tenellus_contig7523.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=128bp
MPAKPKATSDAYLKTKYELVCKERDGLRQSLSVLERDNEELRKSVYELSY
MLSMQGNSGNAALSLCGAGSPTAPSPNTTTAAVATGQAPFEPRLGIGSHH
HLDSLSLMSNGGIGGGMVPRVLVPEAKL