prot_C-tenellus_contig7497.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7497.2.1
Unique Nameprot_C-tenellus_contig7497.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length107
Homology
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BLAST of mRNA_C-tenellus_contig7497.2.1 vs. uniprot
Match: D7FHG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG6_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.330e-18
Identity = 53/107 (49.53%), Postives = 67/107 (62.62%), Query Frame = 0 
Query:    4 ARVLMLATVVNCLLVQSMAFVIVGVGPGVRV----SGGRATNVHVGRRGARSQPLRAASDD-GEEGGFVNPYTAFRKWQMELIDSKARSDPKFEDAVAGLMTEKGMT 105
            +RVL +A  V CL+  + AFV  G G  VR     S G+  +V    +    Q L A+ +  GEE GFVNPYTAFRKWQM+LI+SKA+ D K+ +A AGLM E GMT
Sbjct:    4 SRVLCVAAAVACLVSTAAAFVASGGGHAVRTRAATSAGQQQHVQPAIQQRGVQVLGASEEGAGEERGFVNPYTAFRKWQMDLIESKAKGDEKYPEAFAGLMKEPGMT 110
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7497.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHG6_ECTSI1.330e-1849.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7497contigC-tenellus_contig7497:1012..1938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7497.2.1mRNA_C-tenellus_contig7497.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7497 1012..1938 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7497.2.1 ID=prot_C-tenellus_contig7497.2.1|Name=mRNA_C-tenellus_contig7497.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=107bp
MVLARVLMLATVVNCLLVQSMAFVIVGVGPGVRVSGGRATNVHVGRRGAR
SQPLRAASDDGEEGGFVNPYTAFRKWQMELIDSKARSDPKFEDAVAGLMT
EKGMTK*
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