prot_C-tenellus_contig7444.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7444.2.1
Unique Nameprot_C-tenellus_contig7444.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length261
Homology
BLAST of mRNA_C-tenellus_contig7444.2.1 vs. uniprot
Match: D8LJ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ91_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 1.450e-109
Identity = 163/240 (67.92%), Postives = 199/240 (82.92%), Query Frame = 0
Query:   22 GPTFTIDVSDTSLSQGVGSLNLEGEYSREIVDNVDAGVVYKYNSNRGLPTSLWLSTTQDMGDDTSAKIRAEMDVESKSTVIDCVVEKGDDSVAVDFDTTDNQLGPVRIKKSLDMNGRKVMVQPKVDLQAKTGELVLNAELDGDTTIAELTINQQDESAVLEVSHKLDDINTVSPKMDLKSGDISVRLNRDLGEGASVEVTADKTNVDWEYSEGKWSVNGNIPLEDSGSS-AISFKRSITL 260
            GPTFTIDVSD SLS GVGSLNLEG + RE+VDNVD GVVYK+N  RG+PTSLW+STTQD+GDD +A +RA+MD++SK+ VIDC V  G DSVAVDFDT D+ +GP+RI K LD+NGRKV+VQP VD+Q KTGE+V+ AELDGD T AELT+N  ++SAVLEV H+LDD N +SPK+DLK+GDI+VRLNR LG+  +V+ TA + NVDWEY EG W V GN+PL  +G++ AISFKRSITL
Sbjct:   53 GPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSNGATGAISFKRSITL 292          
BLAST of mRNA_C-tenellus_contig7444.2.1 vs. uniprot
Match: A0A6H5K004_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K004_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 2.540e-109
Identity = 164/240 (68.33%), Postives = 198/240 (82.50%), Query Frame = 0
Query:   22 GPTFTIDVSDTSLSQGVGSLNLEGEYSREIVDNVDAGVVYKYNSNRGLPTSLWLSTTQDMGDDTSAKIRAEMDVESKSTVIDCVVEKGDDSVAVDFDTTDNQLGPVRIKKSLDMNGRKVMVQPKVDLQAKTGELVLNAELDGDTTIAELTINQQDESAVLEVSHKLDDINTVSPKMDLKSGDISVRLNRDLGEGASVEVTADKTNVDWEYSEGKWSVNGNIPLEDSGSS-AISFKRSITL 260
            GPTFTIDVSD SLS GVGSLNLEG + RE+VDNVD GVVYK+N  RG+PTSLW+STTQD+GDD +A +RA+MD++SK+ VIDC V  G DSVAVDFDT D+ +GP+RI K LD+NGRKV+VQP VD+Q KTGE+V+ AELDGD T AELT+N  ++SAVLEV H+LDD N +SPK+DLK+GDI+VRLNR LG+  +V+ TA + NVDWEY EG W V GN+PL   GS+ AISFKRSITL
Sbjct:  133 GPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNERRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVIAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGPWVVKGNVPLTSDGSTGAISFKRSITL 372          
BLAST of mRNA_C-tenellus_contig7444.2.1 vs. uniprot
Match: A0A836CCC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC7_9STRA)

HSP 1 Score: 311 bits (798), Expect = 4.100e-104
Identity = 152/259 (58.69%), Postives = 204/259 (78.76%), Query Frame = 0
Query:    2 MKSITFFCALFATASANSAAGPTFTIDVSDTSLSQGVGSLNLEGEYSREIVDNVDAGVVYKYNSNRGLPTSLWLSTTQDMGDDTSAKIRAEMDVESKSTVIDCVVEKGDDSVAVDFDTTDNQLGPVRIKKSLDMNGRKVMVQPKVDLQAKTGELVLNAELDGDTTIAELTINQQDESAVLEVSHKLDDINTVSPKMDLKSGDISVRLNRDLGEGASVEVTADKTNVDWEYSEGKWSVNGNIPLEDSGSSAISFKRSITL 260
            MK +  F A+ + A A   +GP F ++++D SL  G GSLNLEGEYSRE+VDNV+AGV Y YN+NRGLP+SLW+ST+ D+ DDT    +AE DV+SK+TVI+  +E+G D +++DFDT  N+ GP++++K LDMNGR++ ++P ++++ +TGELV+N E+D D T AELT+NQ DESA LEVSH+LDD N VSPK++LKSGD+SVRLNR L  G  +EVTAD+ NVDWE++E  W+V GNIPLED+G+S ISFKRSI L
Sbjct:    1 MKCVAVFAAILSVAFAGQQSGPVFHVNINDPSLKDGAGSLNLEGEYSRELVDNVNAGVKYDYNANRGLPSSLWVSTSADIDDDTKLCAKAEYDVKSKATVIEARLERGSDGISIDFDTGSNEAGPLKLRKVLDMNGRRLTLEPTINVRDRTGELVINTEVDEDKTTAELTLNQADESASLEVSHRLDDFNVVSPKVNLKSGDVSVRLNRALDNGGVIEVTADRKNVDWEFNENAWTVKGNIPLEDTGASTISFKRSINL 259          
BLAST of mRNA_C-tenellus_contig7444.2.1 vs. uniprot
Match: A0A836CPR3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR3_9STRA)

HSP 1 Score: 286 bits (733), Expect = 3.150e-94
Identity = 145/253 (57.31%), Postives = 194/253 (76.68%), Query Frame = 0
Query:    8 FCALFATASANSAAGPTFTIDVSDTSLSQGVGSLNLEGEYSREIVDNVDAGVVYKYNSNRGLPTSLWLSTTQDMGDDTSAKIRAEMDVESKSTVIDCVVEKGDDSVAVDFDTTDNQLGPVRIKKSLDMNGRKVMVQPKVDLQAKTGELVLNAELDGDTTIAELTINQQDESAVLEVSHKLDDINTVSPKMDLKSGDISVRLNRDLGEGASVEVTADKTNVDWEYSEGKWSVNGNIPLEDSGSSAISFKRSITL 260
            F AL A A+A   +GP   I+V D SLSQGVGSLNL GE SRE+V+NV+AG+ Y YN+NRGLP+SLW+ST+ ++ DD     +AE D++SKST+I+  +E+GDD +A+DFDT  N+ GP+RI+K  D NGR+++V+PK +++ +TGELV+N+E+D D T AELT++Q  +SA LEVSH+LD+ N V PK+DLK+GD+SVRL R L  G  + VTADK N+DWE  E  W+V GNIPLED+  S ISFKRSI+L
Sbjct:    8 FAALAAVATAKQTSGPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRSTISFKRSISL 260          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7444.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ91_ECTSI1.450e-10967.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K004_9PHAE2.540e-10968.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCC7_9STRA4.100e-10458.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPR3_9STRA3.150e-9457.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7444contigC-tenellus_contig7444:1361..2617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7444.2.1mRNA_C-tenellus_contig7444.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7444 1325..3057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7444.2.1 ID=prot_C-tenellus_contig7444.2.1|Name=mRNA_C-tenellus_contig7444.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=261bp
MMKSITFFCALFATASANSAAGPTFTIDVSDTSLSQGVGSLNLEGEYSRE
IVDNVDAGVVYKYNSNRGLPTSLWLSTTQDMGDDTSAKIRAEMDVESKST
VIDCVVEKGDDSVAVDFDTTDNQLGPVRIKKSLDMNGRKVMVQPKVDLQA
KTGELVLNAELDGDTTIAELTINQQDESAVLEVSHKLDDINTVSPKMDLK
SGDISVRLNRDLGEGASVEVTADKTNVDWEYSEGKWSVNGNIPLEDSGSS
AISFKRSITL*
back to top