prot_C-tenellus_contig7407.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7407.1.1
Unique Nameprot_C-tenellus_contig7407.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length269
Homology
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: D8LCY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY6_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 1.060e-37
Identity = 104/267 (38.95%), Postives = 141/267 (52.81%), Query Frame = 0
Query:    8 WREAHGGPDEQGHSLVNRRIRIWWDGDSAFYNADVVAYVSETGKHKVIYVE-DTDIYEEDLSPGKQRWELLDGSASQERRDLPG-----RAAKPTSFNAAHFTSPSSSGKKATYADMALEAIADMKDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIKALAKLVSDGVLEKVKHSFRLSQDYLREEKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGETWEANKQMRQNYERRIQKRNEFLSER 268
            W EA    +E+G +L+  RIRIWWDGD          Y S T KH++IY   DTD+Y EDL  G ++WE+   +   E    PG     +A   +S +    T+P+  G+K+ Y  M LE+I+ + +K+G SLPSIRKWIQ+   ET+EKQKASFN+L+IKA+ KLVS+GV+EKVKHS+RL    + +EK                                                 GE  EAN++MR   E   +KRNEFLS+R
Sbjct:    6 WEEAK--EEERGAALIGSRIRIWWDGDMVXXXXXXXGYDSATAKHQLIYDGVDTDVYIEDLESGSEQWEIERATEGGE----PGAAEAKKAVGESSQSGGGATTPT--GRKSKYLTMVLESISALNEKSGVSLPSIRKWIQDKHPETKEKQKASFNNLTIKAVMKLVSEGVVEKVKHSYRLFPKCVADEK-----ASAKEEPRRKGGSTPAVLTPQAKTGRKPSGTGRKPAAPRATGGRGEAAEANRKMRATMEEVARKRNEFLSKR 259          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: A0A6H5KTV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV3_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 9.150e-37
Identity = 106/270 (39.26%), Postives = 139/270 (51.48%), Query Frame = 0
Query:    8 WREAHGGPDEQGHSLVNRRIRIWWDGDSAFYNADVVAYVSETGKHKVIYVE-DTDIYEEDLSPGKQRWELLDGSASQERRDLPGRAAKPTSFNAAHFTSPS------SSGKKATYADMALEAIADMKDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIK--ALAKLVSDGVLEKVKHSFRLSQDYLREEKRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGETWEANKQMRQNYERRIQKRNEFLSER 268
            W EA    +E+G +L+  R+RIWWDGD          Y S T KH++IY   DTD+Y EDL  G Q+WE+       ER    G      +  AA  +S S      S+G+K+ Y  M LE+I+ + DK+G SLPSIRKWIQ+   ET+EKQKASFN+L+IK  A+ KLVS+G +EKVKHS+RLS   + +EK                                                 GE  EAN++MR   E   +KRNEFLS+R
Sbjct:    6 WEEAK--KEERGAALIGSRVRIWWDGDMVXXXXXXXGYDSATAKHQLIYDGVDTDVYIEDLESGSQQWEI-------ERAIEGGEPGAAEAKKAAGESSQSGGGATTSTGRKSKYLTMVLESISALNDKSGVSLPSIRKWIQDKHPETKEKQKASFNNLTIKVQAVMKLVSEGAVEKVKHSYRLSPKCVADEK---ASAKAEPRRKGGSTPAVITPQEEAKTGRKSSGTGRKPAAARAAGGKGEASEANRKMRATMEEVARKRNEFLSKR 263          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: A0A7R9Y7W9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7W9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.680e-12
Identity = 59/207 (28.50%), Postives = 103/207 (49.76%), Query Frame = 0
Query:    8 WREAHGGPDEQGHSLVNRRIRIWWDGDSAFYNADVVAYVSETGKHKVIYVEDTDIYEEDL-------------SPGKQRWELLDGSASQERRDLPGRAAKPTSFNAAHFTSPSSSGKKATYADMALEAIADM-------KDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIKALAKLVSDGVLEKVKHSFRLSQDYLREEKRRE 194
            W     GP   G +L  RR+ +++ G++ ++ A V  Y +ET    V Y  D  ++  +              +PG++      G++       PG+AA+    +A        +    TYADM ++AI+++         ++G +LP+IRK + +   E ++KQ+ASFNSL++KA+ +L++  VLEK    +R   DY+   KR E
Sbjct:   38 WAPPDTGP--MGAALEGRRVAVYYHGEAQYFEAVVRRYHAETDTFTVEYESDPGLFFVETLGDDYHVYVGPEPAPGRKLIVPGPGASVPSTAQAPGQAAE----SALDQQKKGKAKGNRTYADMCMDAISNLGATHGGRAARDGFTLPAIRKSLMSVCPEVKQKQRASFNSLTLKAMQRLIAQSVLEKNGSQYRFHPDYIDRIKRAE 238          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: W7TYI9_9STRA (Swi snf matrix actin dependent regulator of subfamily member 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYI9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.080e-10
Identity = 38/84 (45.24%), Postives = 59/84 (70.24%), Query Frame = 0
Query:  112 KATYADMALEAIADMKDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIKALAKLVSDGVLEK-VKHSFRLSQDYLREEKRRE 194
            KATYAD+ +EA+ ++  ++G+SL +IRKWI  +  E   KQKASFN+L+ KA+ KL ++ V+++  K SFR S  YL  E+ ++
Sbjct:  151 KATYADLIIEALKELHGRDGASLVAIRKWICKHNAEAASKQKASFNTLTKKAILKLEAEDVVQRNTKSSFRFSPSYLFREREKQ 234          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: K0SPF3_THAOC (H15 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPF3_THAOC)

HSP 1 Score: 59.3 bits (142), Expect = 2.410e-6
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0
Query:  106 PSSSGKKATYADMALEAIADMKDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIKALAKLVSDGVLEKVKHSFRLSQDYLREEK 191
            P+S  +K TY +M  EAI  +KD+ GSS+ +I KWIQ+N   T+  Q   F     KA+ K V D    ++K+  ++S D+ +++K
Sbjct:  190 PTSLSRKPTYVEMVHEAIRSLKDRKGSSIFAIGKWIQSNLHYTKPVQAKMFKIFINKAVNKGVKDSRFVRIKNHVKISSDWTKKQK 275          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: A0A7S4AA51_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AA51_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.630e-6
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  121 EAIADMKDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIKALAKLVSDGVLEKVKHSFRLSQD 185
            +AI DMKD+ GSSL +I KWI++N  E +E +K    S    ALAK V+DGVL KVK S++LS D
Sbjct:    9 KAILDMKDRTGSSLVAINKWIESN--EKKEIKKHVMKS----ALAKAVTDGVLVKVKASYKLSPD 67          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: A0A7S4IVS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IVS6_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.660e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   14 GPDEQGHSLVNRRIRIWWDGDSAFYNADVVAYVSETGKHKVIYVEDTDIYEEDLSPGKQRWELLD 78
            GP   G +++NR I++W++G+  +Y ADV  Y ++TGKH VIY  D     EDL+   + W LLD
Sbjct:  349 GPRGAGRAIMNRTIKVWYEGNQEYYVADVYNYDAKTGKHLVIYKSDLSESWEDLA--SETWMLLD 411          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: A0A7R9UE77_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE77_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.220e-5
Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    6 GTWREAHGGPD--EQGHSLVNRRIRIWWDGDSAFYNADVVAYVSETGKHKVIYVEDTDIYEE--DLSPGK 71
            G WR+ H      E+   LV RR+RI+WDG+  ++   V  +  ETGKHKVIY ++TD  E   DLS G+
Sbjct:  230 GDWRKPHESERVVERAEHLVGRRVRIFWDGNDGYFTGTVAEFSPETGKHKVIYDDETDSEELLCDLSLGQ 299          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: A0A1E7FB62_9STRA (H15 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB62_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.400e-5
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  121 EAIADMKDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIKALAKLVSDGVLEKVKHSFRLSQD 185
            +AI DMKD+ GSSLP+++KW+     ET EK++   + +S  AL K V+DG L KVK S++LS D
Sbjct:    9 KAILDMKDRTGSSLPALKKWL-----ETNEKKEIKKHVMSA-ALKKGVTDGDLVKVKASYKLSPD 67          
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Match: A0A1E7F8V9_9STRA (H15 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F8V9_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 6.040e-5
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  121 EAIADMKDKNGSSLPSIRKWIQNNFTETREKQKASFNSLSIKALAKLVSDGVLEKVKHSFRLS 183
            +AI DMKD+ GSSLP+++KWI+ N  E ++   ++       AL K V+DGVL KVK S+++S
Sbjct:    9 KAILDMKDRTGSSLPALKKWIETNEKEIKKHVMSA-------ALKKGVTDGVLVKVKASYKVS 64          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7407.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LCY6_ECTSI1.060e-3738.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTV3_9PHAE9.150e-3739.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9Y7W9_9STRA4.680e-1228.50Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W7TYI9_9STRA3.080e-1045.24Swi snf matrix actin dependent regulator of subfam... [more]
K0SPF3_THAOC2.410e-637.21H15 domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7S4AA51_9STRA2.630e-653.85Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S4IVS6_9STRA9.660e-643.08Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7R9UE77_9STRA1.220e-544.29Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1E7FB62_9STRA2.400e-549.23H15 domain-containing protein n=1 Tax=Fragilariops... [more]
A0A1E7F8V9_9STRA6.040e-546.03H15 domain-containing protein n=1 Tax=Fragilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 106..179
e-value: 1.9E-13
score: 60.7
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 113..178
e-value: 2.3E-14
score: 53.5
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 111..184
score: 24.02
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 114..183
e-value: 1.93112E-15
score: 68.0315
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 107..188
e-value: 1.7E-15
score: 58.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..268
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 112..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7407contigC-tenellus_contig7407:3806..6326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7407.1.1mRNA_C-tenellus_contig7407.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7407 3481..6326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7407.1.1 ID=prot_C-tenellus_contig7407.1.1|Name=mRNA_C-tenellus_contig7407.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=269bp
MADQGGTWREAHGGPDEQGHSLVNRRIRIWWDGDSAFYNADVVAYVSETG
KHKVIYVEDTDIYEEDLSPGKQRWELLDGSASQERRDLPGRAAKPTSFNA
AHFTSPSSSGKKATYADMALEAIADMKDKNGSSLPSIRKWIQNNFTETRE
KQKASFNSLSIKALAKLVSDGVLEKVKHSFRLSQDYLREEKRREREEAKA
KGGIALLRLQVTDAKGKHGPGLGMGSGGQRSNIRGRGRGGGETWEANKQM
RQNYERRIQKRNEFLSER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf