prot_C-tenellus_contig7403.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7403.1.1
Unique Nameprot_C-tenellus_contig7403.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length299
Homology
BLAST of mRNA_C-tenellus_contig7403.1.1 vs. uniprot
Match: A0A6H5JP00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP00_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.930e-60
Identity = 140/371 (37.74%), Postives = 183/371 (49.33%), Query Frame = 0
Query:    2 FTKADNQHTGFLDPEQFRNLLEHLPESSSLKEDEMDRLLCLVDTEGNGRVSYRALVSFVVSHLGDWRKKLPEIASDLAHAVDQNLYGGRAAISNLQRRLEIADPRGVGRLTPTALGR-----------CLRNVGLGLSMSQLDQMALAMDTRGDGLIPISPVLDHLNE----------------------------CVALANSRFGATE------------------------------AAEGVS-KMYPAKVMGEFCAAVWALADQERERMAKSYNKGNGRLMEYSGAAL--WHAPLRRVFDRFLDVDGDGFLTKADLETCLPDLGMRGS-KEFARVVLQNMDARNRGLGQATFKDFVNFMLVRGGEHER 299
            F  AD   TGF++  QFR +L  LP +  L EDE+DRL  L+D +G+GRVSYR+L+  +V HLGDW K++P++AS+L+ A+    YG +A + NL RRL IAD +  GRL P+   R           CLR+VGL L+   L +M   +D  GDGLIPI+PVL+ L                               +A A  ++  +E                              A  G S + Y  K          AL D  R R  K      G   E    A+  W   LRRVFDR LDVDGDGFLT+ DL  CLP++G+  + ++ AR +L  MD R RGLGQATFKDFV F+   G    R
Sbjct:   58 FVAADRDKTGFINRAQFRAVLASLPGTQDLTEDEVDRLSTLLDDQGDGRVSYRSLLDLLVRHLGDWHKRIPKVASELSLALQNTQYGLKACVENLSRRLNIADHKSTGRLPPSTFTRYGLELSSSGKRCLRSVGLSLAPESLGEMVSVLDAYGDGLIPITPVLEFLRREAGISPEGGDMQQQAGGEVGFAFREAVRSLAKAEQQYANSEDESDGGGTGGYGHPDRDAATPRGATTFNRIAEPGASARSYDGKTANR------ALLDTARLRREKRGRTSGGIREERGAWAIIPWSVCLRRVFDRRLDVDGDGFLTEGDLAACLPEIGVHVTGRDAARTLLSAMDFRQRGLGQATFKDFVEFVGTNGSSRRR 422          
BLAST of mRNA_C-tenellus_contig7403.1.1 vs. uniprot
Match: D7G7I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I0_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 6.640e-21
Identity = 57/112 (50.89%), Postives = 68/112 (60.71%), Query Frame = 0
Query:  191 AVWALADQERERMAKSYNKGNGRLMEYSGAAL--WHAPLRRVFDRFLDVDGDGFLTKADLETCLPDLGMRGS-KEFARVVLQNMDARNRGLGQATFKDFVNFMLVRGGEHER 299
            A WAL D  R R  K      G   E    A+  W   LRRVFDR+LDVDGDGFLT+ DL  CLP++G+  + ++ AR +L  MD+R RGLGQATFKDFV FM   G    R
Sbjct: 1680 ANWALRDTARLRREKRGRTSGGIREERGAWAIIPWSVCLRRVFDRWLDVDGDGFLTEGDLAACLPEIGVYVTGRDAARTLLSAMDSRQRGLGQATFKDFVEFMGTNGSSRRR 1791          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7403.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP00_9PHAE1.930e-6037.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I0_ECTSI6.640e-2150.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 109..147
e-value: 0.01
score: 15.6
coord: 9..53
e-value: 0.0058
score: 16.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 127..162
score: 5.224
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 91..126
score: 5.671
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..28
score: 8.739
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 31..66
score: 8.432
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 233..258
score: 8.962
NoneNo IPR availableGENE3D1.10.238.10coord: 1..83
e-value: 1.2E-8
score: 36.7
NoneNo IPR availableGENE3D1.10.238.10coord: 84..154
e-value: 4.4E-5
score: 25.3
NoneNo IPR availableGENE3D1.10.238.10coord: 224..292
e-value: 3.0E-9
score: 39.0
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 227..290
NoneNo IPR availablePANTHERPTHR23050:SF330RE52086Pcoord: 227..290
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 236..248
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..291
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 93..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7403contigC-tenellus_contig7403:3648..5708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7403.1.1mRNA_C-tenellus_contig7403.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7403 3648..5732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7403.1.1 ID=prot_C-tenellus_contig7403.1.1|Name=mRNA_C-tenellus_contig7403.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=299bp
MFTKADNQHTGFLDPEQFRNLLEHLPESSSLKEDEMDRLLCLVDTEGNGR
VSYRALVSFVVSHLGDWRKKLPEIASDLAHAVDQNLYGGRAAISNLQRRL
EIADPRGVGRLTPTALGRCLRNVGLGLSMSQLDQMALAMDTRGDGLIPIS
PVLDHLNECVALANSRFGATEAAEGVSKMYPAKVMGEFCAAVWALADQER
ERMAKSYNKGNGRLMEYSGAALWHAPLRRVFDRFLDVDGDGFLTKADLET
CLPDLGMRGSKEFARVVLQNMDARNRGLGQATFKDFVNFMLVRGGEHER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair