prot_C-tenellus_contig74.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig74.3.1
Unique Nameprot_C-tenellus_contig74.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length194
Homology
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: D7FZC8_ECTSI (ATP synthase subunit d, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC8_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 3.200e-43
Identity = 82/193 (42.49%), Postives = 115/193 (59.59%), Query Frame = 0
Query:    1 MLVGALRRSVPRAAAQHVDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEWCTNIK 193
            M+ G +RRSVPRA+   VDW ++   CV  E K+ V+  K EVA+ + +H+K+S  PEPIDW  YKEFFGNHP IAKL+ +Y S      +P  E+        +V + K I    S      +   +  QLA      ++AKV  L  +   L+ N T  +TTVAD+++KYP+IE+E + E+ANHEWCTN+K
Sbjct:    1 MIGGVIRRSVPRASGITVDWAKMAGNCVAAESKSFVIGLKQEVAQADAMHEKYSKQPEPIDWASYKEFFGNHPTIAKLQEEYESTKQVA-MPAPEAPEMMMKPVAVGDPKDIDWEGSWKTYGELFDGNTAQLAAAQTGNTEAKVVALADKEQLLKNNMTNDQTTVADIFKKYPQIEQECNDEVANHEWCTNLK 192          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: A0A7S2WK77_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK77_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.540e-25
Identity = 66/194 (34.02%), Postives = 105/194 (54.12%), Query Frame = 0
Query:    1 MLVGALRRSV-PRAAAQH-VDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEWCTNI 192
            M + A+RRSV  R AAQ  +DW  + +K   D  K+E+ R +A   EI+GL   +S  P PID+  YK    +   +AK E++Y + + PQ V ++ +EI+++++                           + A   V+ES+A++E LT  V  +E  KT   T++ D++  YPE+E E+D+EIANHEW  +I
Sbjct:   32 MAMNAMRRSVFGRVAAQRSIDWAAVGAKLSSDGAKSELGRLRAAYGEIQGLSNTYSTPPPPIDFDHYKSKISDSEVVAKFEAEYKNVAYPQCVVDELAEIKSQYD------------------------ELFEQAETSVSESQARIEALTQMVEQMEAKKTGPGTSLEDIYAMYPELEAEIDEEIANHEWGKDI 201          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: A0A7S2CQS1_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQS1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 8.950e-21
Identity = 62/189 (32.80%), Postives = 99/189 (52.38%), Query Frame = 0
Query:    6 LRRSV-PRAAAQH-VDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEWCTNI 192
            LRR+V PRA A   +DW  + SK   D  +A V + +A+  EI  L   ++  P PID+  YK    +   +AK E +Y+  ++      DE+              A  ++L H  +T+  ++ A ++A   V ESK K+ EL+  VA +E   T   TT+ D++E YP+++ E++ EI NHEW  +I
Sbjct:    5 LRRAVLPRALAHRSIDWAALTSKATTDSSRAAVSQLRAKHGEISALASTYAEPPPPIDFEAYKAKISSKDIVAKFEEEYSKINI------DEA------------TYAQHMQLMHPEDTSDKETKAAEVAAS-VEESKGKIAELSKLVALMESKMTGPTTTLEDLYEVYPDLQAEIEDEIENHEWSKDI 174          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: A0A7S3JVE1_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVE1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.640e-19
Identity = 58/175 (33.14%), Postives = 91/175 (52.00%), Query Frame = 0
Query:   23 IVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQY-----VPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEWCTNI 192
            ++S    DE K+E+ R K   +EI  L  K+   PEPID++ YK   G    + K+E+ Y+   +P++      PE+E+E+                               L+ A  L+ ESKA++ EL A +A L+ +K   +TTV D+++ +PEIEKEVD+EI NHEW  ++
Sbjct:   26 LLSVVSGDEAKSEINRLKVMASEISSLEAKYLGEPEPIDFSMYKSKLGAGV-VDKIEALYSQVHIPKFPDGGMTPEEENEL----------------------------DQTLKEADKLIDESKARIVELNAEIASLKASKVGPDTTVEDIYKAFPEIEKEVDEEIHNHEWGKDV 171          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: A0A0P1A9B0_PLAHL (ATP synthase subunit d, mitochondrial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9B0_PLAHL)

HSP 1 Score: 83.6 bits (205), Expect = 1.050e-16
Identity = 57/185 (30.81%), Postives = 95/185 (51.35%), Query Frame = 0
Query:    6 LRRSVPRAAAQH--VDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEW 188
            LR+ V R+A Q   ++W  I  K  D   +A +   +    +I G  + +   PEPID+  Y+    N   +  +E++Y + S P   PE E ++ A+      E   +R+     ++    Q +      + V++SKA++EEL   +  +EE +TT  TT+ ++   YPE+E+EVD EIAN EW
Sbjct:    4 LRKQVVRSALQTRAIEWASISQKLTDPRARAALDSLRDVHGQIAGEARTYLKEPEPIDFDYYRSVIKNKDLVDAMETNYKNISYPTITPE-ELDVFAKSSDLPEE---LRVNEQETIDKLFSQLN------EKVSDSKARIEELKELIGLMEETRTTLATTMDEITAMYPEVEEEVDDEIANLEW 178          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: H3GIG2_PHYRM (ATP synthase subunit d, mitochondrial n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIG2_PHYRM)

HSP 1 Score: 83.2 bits (204), Expect = 7.370e-16
Identity = 59/185 (31.89%), Postives = 92/185 (49.73%), Query Frame = 0
Query:    6 LRRSVPRAAAQ--HVDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEW 188
            LR+ V R A Q   ++W  I  K  D   +A +   +    +I    + F   PE ID+  Y+    N   +  +ES+Y S + P   PE E ++ ++ E    E   +RL     V+    Q +      + V +SKA++EEL   +  +EE +TT  TT+ +V   YPE+E+E+D EIAN EW
Sbjct:   92 LRKQVVRRALQTRSIEWADISQKLTDPRARAALDSLRDVHGQIAAEARAFVKEPEAIDFDYYRSVVKNKELVDAMESNYKSIAFPTITPE-ELDVASKSEELPDE---LRLNEQETVDKLFAQLN------EKVTDSKARIEELKELIGLMEETRTTLATTMDEVTAMYPEVEEEIDDEIANLEW 266          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: A0A484E6X4_BRELC (ATP synthase subunit d, mitochondrial n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6X4_BRELC)

HSP 1 Score: 80.9 bits (198), Expect = 1.120e-15
Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   19 DWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEW 188
            +W  I  K  D   +A +   +    ++    + +   PEPID+  Y+    N   +  +E++Y S S P   PE E +I A+ +    E   +RL     V+    Q +      + VA+SKA++EEL   +  +EE +TT +TT+ ++   YPE+E+E+D EIAN EW
Sbjct:   19 EWEAISKKLTDPRARAALDSLRDAHGQMAAEARMYVKEPEPIDFDYYRSVIKNKELVDAMEANYKSISFPVITPE-ELDISAKSDELPEE---LRLNEQEVVDKLFSQLN------EKVADSKARIEELKELIGLMEETRTTLDTTMDEMTAMYPEVEEEIDDEIANLEW 178          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: D0NC96_PHYIT (ATP synthase subunit d, mitochondrial n=19 Tax=Phytophthora TaxID=4783 RepID=D0NC96_PHYIT)

HSP 1 Score: 79.3 bits (194), Expect = 9.720e-15
Identity = 56/185 (30.27%), Postives = 90/185 (48.65%), Query Frame = 0
Query:    6 LRRSVPRAAAQH--VDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEW 188
            LR+ V R A Q   ++W  I  K  D   +A +   +    ++    + +   PE ID+  Y+    N   +  +E++Y S S P   PE E +  A+   S    + +RL     V+    Q        + V +SKA++EEL   +  +EE +TT  TT+ +V   YPE+E+E+D EIAN +W
Sbjct:   46 LRKQVVRRALQTRAIEWTAISQKLTDPRARAALDSLRDVHGQVAAEARNYVKEPEAIDFDYYRSVIKNKELVDAMEANYKSISFPTITPE-ELDASAK---SADLPEELRLNEQETVDKLFAQLD------EKVTDSKARIEELKELIGLMEETRTTLATTMDEVTAMYPEVEEEIDDEIANLDW 220          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: M4C2M3_HYAAE (ATP synthase subunit d, mitochondrial n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2M3_HYAAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.210e-14
Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = 0
Query:    6 LRRSVPRAAAQHVDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEW 188
            +RR V +  A  ++W+ I  K  D   +A +   +    +I    + +   PE ID+  Y+    N   +  +ES+Y + + P+  PE E ++ A+  P + E   +RL     V+    Q +      + VA+SKA++EEL   +  +EE +TT  T++ +V   YPE+E+E+D EIAN EW
Sbjct:    9 VRRGVLQTRA--IEWSTISQKLSDPRARAALDSLRDVHGQIAAEARVYLKEPEAIDFDYYRSVIKNKELVDAMESNYKTIAFPKITPE-ELDVAAK-SPELPE--ELRLNEQETVDQLFSQLN------EKVADSKARIEELKELIGLMEETRTTLATSMDEVTAMYPEVEEEIDDEIANLEW 179          
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Match: A0A3M6VTJ4_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTJ4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.320e-14
Identity = 59/185 (31.89%), Postives = 90/185 (48.65%), Query Frame = 0
Query:    6 LRRSVPRAAAQH--VDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLHQKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRARFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTARVAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEW 188
            LR+ V   A Q   ++W+ I  K  D   +A +        +I    + F   PE ID+  Y+    N   +  +ES+Y S S P   PE E ++ A+   S      +RL     V+    Q +      + V +SKA++EEL   +  +EE +TT  TT+ +V   YPE+E+E+D EIAN EW
Sbjct:    4 LRKQVVGRALQTRAIEWSTISQKLSDPRARAALDSLHDVHGQIAAEARNFVKEPEAIDFDYYRSVIKNKELVDAMESNYKSISFPIITPE-ELDVAAK---SADLPDDLRLDEQDTVDKLFSQLN------EKVTDSKARIEELKELIGLMEETRTTLATTMDEVTAMYPEVEEEIDDEIANLEW 178          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig74.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FZC8_ECTSI3.200e-4342.49ATP synthase subunit d, mitochondrial n=2 Tax=Ecto... [more]
A0A7S2WK77_9STRA1.540e-2534.02ATP synthase subunit d, mitochondrial n=1 Tax=Rhiz... [more]
A0A7S2CQS1_9STRA8.950e-2132.80ATP synthase subunit d, mitochondrial n=1 Tax=Dict... [more]
A0A7S3JVE1_9STRA3.640e-1933.14ATP synthase subunit d, mitochondrial n=1 Tax=Aure... [more]
A0A0P1A9B0_PLAHL1.050e-1630.81ATP synthase subunit d, mitochondrial n=1 Tax=Plas... [more]
H3GIG2_PHYRM7.370e-1631.89ATP synthase subunit d, mitochondrial n=1 Tax=Phyt... [more]
A0A484E6X4_BRELC1.120e-1531.18ATP synthase subunit d, mitochondrial n=1 Tax=Brem... [more]
D0NC96_PHYIT9.720e-1530.27ATP synthase subunit d, mitochondrial n=19 Tax=Phy... [more]
M4C2M3_HYAAE1.210e-1430.60ATP synthase subunit d, mitochondrial n=1 Tax=Hyal... [more]
A0A3M6VTJ4_9STRA2.320e-1431.89ATP synthase subunit d, mitochondrial n=1 Tax=Pero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 130..164
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPFAMPF05873Mt_ATP-synt_Dcoord: 12..176
e-value: 4.0E-7
score: 30.0
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPANTHERPTHR12700ATP SYNTHASE SUBUNIT D, MITOCHONDRIALcoord: 10..188
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialGENE3D6.10.280.70coord: 10..155
e-value: 5.4E-16
score: 60.7
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialSUPERFAMILY161065ATP synthase D chain-likecoord: 12..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig74contigC-tenellus_contig74:4270..6584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig74.3.1mRNA_C-tenellus_contig74.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig74 4270..6584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig74.3.1 ID=prot_C-tenellus_contig74.3.1|Name=mRNA_C-tenellus_contig74.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=194bp
MLVGALRRSVPRAAAQHVDWNQIVSKCVDDEHKAEVMRFKAEVAEIEGLH
QKFSVTPEPIDWTQYKEFFGNHPEIAKLESDYTSASLPQYVPEDESEIRA
RFEPSVSEVKAIRLRLSHAVNTTIIQSSALQLARDLVAESKAKVEELTAR
VAFLEENKTTAETTVADVWEKYPEIEKEVDQEIANHEWCTNIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008689ATP_synth_F0_dsu_mt
IPR036228ATP_synth_F0_dsu_sf_mt