prot_C-tenellus_contig7391.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7391.1.1
Unique Nameprot_C-tenellus_contig7391.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length146
Homology
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.120e-33
Identity = 77/144 (53.47%), Postives = 93/144 (64.58%), Query Frame = 0
Query:    3 DEEGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAGLR 146
            +E GY LDP  R+G   + +   MLEMGWLFT VV Y Q V+         AG G GR+QQAFVF+LK ++TEYYRLIAVL AQLNL++E    GAG            GT GLTL+RL VWV DPM+RL +MA +V AAA L+
Sbjct:  269 EESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGS------AGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAG------------GTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLK 394          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: A0A7S2SDQ7_9STRA (Spindle pole body component (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDQ7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.950e-19
Identity = 55/142 (38.73%), Postives = 71/142 (50.00%), Query Frame = 0
Query:    5 EGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAGLR 146
            E +  D    +  A +DL   + EMGWL+  +  Y+            GAG   G + QAF   L+ E+TEYYRL+AVLE QL  D     G    +             GLTLRRLAVW  DP+ERL+LMA +V +   LR
Sbjct:   23 ESFVFDASFHISPATKDLASQLCEMGWLYNRISKYLSS--------RAGAGRSVGAMGQAFCSGLQLELTEYYRLVAVLETQLT-DEPPRLGAPSEV-------------GLTLRRLAVWSQDPLERLQLMAMLVESVGDLR 142          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: A0A835YR49_9STRA (Spindle pole body component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR49_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.380e-18
Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 0
Query:    5 EGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMV 139
            + +A+DP   V  A +DL   + EMGWLF  V  Y+++         + AG   G ++ AF  +L+ E+T+Y+RL+AV+EAQL                  G     G   LTLRRLA+W +DPMERL+LMA ++
Sbjct:  251 QAFAVDPSLSVSPATRDLVLRLCEMGWLFMHVTQYVEQT--------LAAGEAVGHVRLAFAQSLQDELTDYFRLLAVMEAQLG-----------------GAEGDQGGECLTLRRLALWSVDPMERLRLMATLI 360          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: UPI001B88C514 (gamma-tubulin complex component 3 homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C514)

HSP 1 Score: 87.8 bits (216), Expect = 2.210e-17
Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 0
Query:    5 EGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAG 144
            E Y +DP   + +A++ L   + E GWL+ ++  Y++    ++++ ++G         Q+F   L  E+TEYYRLIAVLEAQL  + +      G+            T+ LTLRRLAVW  DP+ RLK++AA+V    G
Sbjct:  280 ESYRIDPQAGIPKAVRQLISKLAECGWLYNKIKHYVESRSFDKAFGLVG---------QSFCTALHEELTEYYRLIAVLEAQLQQEQDP-----GIAE----------TSSLTLRRLAVWTFDPLVRLKILAALVDVCKG 395          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: UPI001E1DDA88 (gamma-tubulin complex component 3-like isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDA88)

HSP 1 Score: 87.4 bits (215), Expect = 3.010e-17
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 0
Query:    4 EEGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAG 144
            ++ Y +D    + +AI+ L   + E GWLF +V +Y++    ++++ ++G         Q+F   L++E+TEYYRL+AVLE+QL  + +   G                 AG+TLRRL VW  DP+ RLK +AAMV    G
Sbjct:  276 KDAYKVDAQAGIPKAIRQLVSKLAECGWLFNKVKNYVETRSADKTFGLVG---------QSFCAALQQELTEYYRLVAVLESQLQEELDQGIG--------------MSNAGVTLRRLVVWTFDPLIRLKSLAAMVDVCKG 393          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: UPI001EAFA618 (gamma-tubulin complex component 3 homolog n=3 Tax=Haliotis TaxID=6452 RepID=UPI001EAFA618)

HSP 1 Score: 87.0 bits (214), Expect = 4.100e-17
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    5 EGYALDPH----CRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAG 144
            EGY +DP     C + +A++ L   + E GWL+ ++ +Y++    ++++ ++G         Q+F   L  EMTE+YRLIAVLEAQL  + +              E       GLTLRRL VW  DP+ RLK +AA+V    G
Sbjct:  280 EGYRIDPTVSFVCGIPKAVRQLISKLAECGWLYNKIKAYVETRSSDKAFGLVG---------QSFCAALHHEMTEFYRLIAVLEAQLQQEQD--------------EGFSESQPGLTLRRLMVWTFDPLVRLKSLAALVDVCKG 400          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: V3ZZ97_LOTGI (Gamma-tubulin complex component n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZZ97_LOTGI)

HSP 1 Score: 85.9 bits (211), Expect = 1.030e-16
Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 0
Query:    4 EEGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAG 144
            ++GY +D    + +A++ L   + E GWL+ +  +Y+     ++++ ++G         Q+F   L +E+TEYYR I V+EAQL  + +A                     GLTLRRLAVW  DP+ RLK++AA+V A  G
Sbjct:  210 KDGYRIDSQAGIPKAVRQLVSKLAECGWLYNKTKTYVTSWSTDKAFGLVG---------QSFCAALHQELTEYYRFITVMEAQLQHEQDAG-------------FEDSSNTGLTLRRLAVWTFDPLVRLKVLAALVDACKG 328          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: A0A1S3J7J9_LINUN (Gamma-tubulin complex component n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J7J9_LINUN)

HSP 1 Score: 85.5 bits (210), Expect = 1.410e-16
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 0
Query:    6 GYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAG 144
            GY +D    +  A++     + E GWL+T++  Y      ++++ ++G         Q+F   L +E+TEYYRLIAVLEAQL  + +   G               G  GLTLR+L+VW  DP+ RLK +AA+V    G
Sbjct:  269 GYRIDDKAGIARAVRQKVTKLAECGWLYTKIRKYADARSSDKAFGLVG---------QSFCAALHQELTEYYRLIAVLEAQLQQEHDQGVG--------------MGPGGLTLRQLSVWTFDPLSRLKALAALVDVCKG 384          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: UPI001457F62D (gamma-tubulin complex component 3-like n=3 Tax=Pectinidae TaxID=6566 RepID=UPI001457F62D)

HSP 1 Score: 84.0 bits (206), Expect = 4.890e-16
Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = 0
Query:    4 EEGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAG 144
            +EGY +D    + +AI+ L   + E GWL+++   YIQ    ++++ ++G         Q+F   L +E+TEYYRLIAVLE QLN       G  G+I+ +         + +TLR+L VW  DP+ RLK +A +V    G
Sbjct:  277 KEGYRIDSQAGIPKAIRQLVSKLAECGWLYSKTKDYIQTRSADKTFGLVG---------QSFCAALHQELTEYYRLIAVLEGQLNQ------GDIGLISPEE--------SSITLRQLVVWTFDPLLRLKTLATVVDVCRG 394          
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Match: C1EDY5_MICCC (Gamma-tubulin complex component (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EDY5_MICCC)

HSP 1 Score: 83.2 bits (204), Expect = 8.960e-16
Identity = 56/144 (38.89%), Postives = 79/144 (54.86%), Query Frame = 0
Query:    7 YALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYFMMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGVIAVDNGEXXXXGTAG----LTLRRLAVWVMDPMERLKLMAAMVGAAAGLR 146
            Y +DP   V    +DL   + E+GWLF  V + +  V+        G G   G ++QAF   ++ E+ +YYRLIAVLEAQ  +   +A     + A   G     GTAG    LTLRRL+VW+ +P+ RL+L+A +V AAA  R
Sbjct:  184 YVVDPAAPVRPGARDLARKLTELGWLFRRVRAALGGVDEA------GLGGDGGSVRQAFRAAVQAELADYYRLIAVLEAQAQVPMASA-----LEAPTTGTGG--GTAGGGTYLTLRRLSVWLAEPLRRLRLLAVLVDAAADAR 314          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7391.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W1_ECTSI2.120e-3353.47Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
A0A7S2SDQ7_9STRA3.950e-1938.73Spindle pole body component (Fragment) n=1 Tax=Rhi... [more]
A0A835YR49_9STRA1.380e-1837.78Spindle pole body component n=1 Tax=Tribonema minu... [more]
UPI001B88C5142.210e-1735.71gamma-tubulin complex component 3 homolog n=1 Tax=... [more]
UPI001E1DDA883.010e-1734.75gamma-tubulin complex component 3-like isoform X1 ... [more]
UPI001EAFA6184.100e-1735.42gamma-tubulin complex component 3 homolog n=3 Tax=... [more]
V3ZZ97_LOTGI1.030e-1633.33Gamma-tubulin complex component n=1 Tax=Lottia gig... [more]
A0A1S3J7J9_LINUN1.410e-1634.53Gamma-tubulin complex component n=2 Tax=Lingula un... [more]
UPI001457F62D4.890e-1635.46gamma-tubulin complex component 3-like n=3 Tax=Pec... [more]
C1EDY5_MICCC8.960e-1638.89Gamma-tubulin complex component (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 17..143
e-value: 3.1E-18
score: 66.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7391contigC-tenellus_contig7391:616..2255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7391.1.1mRNA_C-tenellus_contig7391.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7391 616..2282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7391.1.1 ID=prot_C-tenellus_contig7391.1.1|Name=mRNA_C-tenellus_contig7391.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=146bp
MRDEEGYALDPHCRVGEAIQDLTCTMLEMGWLFTEVVSYIQRVEREESYF
MMGAGSGSGRLQQAFVFTLKREMTEYYRLIAVLEAQLNLDAEAAAGGAGV
IAVDNGEGGGGGTAGLTLRRLAVWVMDPMERLKLMAAMVGAAAGLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041470GCP_N