prot_C-tenellus_contig7380.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7380.1.1
Unique Nameprot_C-tenellus_contig7380.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length214
Homology
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: A0A6H5L1C1_9PHAE (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1C1_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 5.510e-54
Identity = 109/210 (51.90%), Postives = 138/210 (65.71%), Query Frame = 0
Query:    1 PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEEKGS-MLCEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDAIAGEALDAFRQSFGGDEPDD--TVGGKRKAG-TGSGDSVLKKAKGDSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARV 206
            PR+VAL+ QEE  EGG QL P G N + LPFADEVRE    +     +  EVKE   +AAE VVKAL L   + R+F+NP LQRHYAALQA+ALSEE+I WDP K+D TRPD + LDA  G  L+ F+ S+GGD+ DD    G KR AG +G G    +    D  SK++W+    K ++D +T+P LK++LKS G+   GKK DLVARV
Sbjct:  411 PRMVALLPQEEVVEGGEQLQPGGFNTVVLPFADEVREAKAPQTADDDVKPEVKESGVSAAEGVVKALKLESFDFRKFENPVLQRHYAALQALALSEEEISWDPEKDDRTRPDEKGLDAAGGPVLEEFKVSYGGDQEDDLPAAGAKRSAGGSGEGSGAKRVKTEDDASKINWQEELAKGQIDRFTVPTLKSFLKSRGMSATGKKGDLVARV 620          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: A0A7S2Y142_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y142_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.200e-35
Identity = 87/211 (41.23%), Postives = 123/211 (58.29%), Query Frame = 0
Query:    1 PRLVALIAQEEETE-GGLQLSPPGLNMIPLPFADEVRE--PLNNEEKGSMLCEVKEESQTAAENVVKALGL--AKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDAIAGEALDAFRQSFGGDEPDDTVGGKRKAGTGSGDSVLKKAKGDSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARV 206
            PRLVAL+ QEE  E GG+Q++PPG++++ LP+AD++R+  P    +     CE   E   AA  +V  + L         F+NP LQ+HYAALQAIAL +E +EWD  K+DTT PD E L    G  +D+FR S+GGD  ++    K             KAK DS   ++W  A    ++ ++T+ +LK +LKS  LP GGKK DL+ R+
Sbjct:   31 PRLVALMPQEEVVEEGGVQITPPGMHVVFLPYADDLRDLPPCKPSD-----CEATAEQVAAASQLVSTIQLDNESFSFYNFENPVLQKHYAALQAIALKQEGLEWDDTKDDTTLPDLEGLAQAKG-VMDSFRASYGGDVEEEAKP-KXXXXXXXXXXXXXKAKKDS-GPINWTEAIASGQIYKFTVAVLKEFLKSKNLPTGGKKQDLIDRI 233          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: A0A835ZF42_9STRA (SPOC like C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF42_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.340e-31
Identity = 69/154 (44.81%), Postives = 103/154 (66.88%), Query Frame = 0
Query:   58 AAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDAIAGEALDAFRQSFG-GDEPDDTVGGKRKAGTGSGDSVLKKAKGD-SHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            AAE V++AL +   +CR ++NP LQ+HYA LQA+AL E+++EW  +K+D TRP++  +D  AGE L A +++ G GDEP+D    KRKA   +G +  KK K +   + ++W A A    +  +T P LKA LKS+GLP+ GKKA+L+ R+ N+
Sbjct:  465 AAEQVLQALQIPDFDCRNYENPMLQKHYAGLQALALGEKELEWKEDKDDYTRPNHVQIDQAAGEPLQALKEACGLGDEPEDIPDPKRKAKAPAGGAPAKKVKREVEDADINWAAEAASGGLQAFTNPQLKAGLKSLGLPVSGKKAELIQRIQNN 618          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: B8B7W3_ORYSI (SAP domain-containing protein n=3 Tax=Oryza TaxID=4527 RepID=B8B7W3_ORYSI)

HSP 1 Score: 116 bits (291), Expect = 3.680e-28
Identity = 76/212 (35.85%), Postives = 115/212 (54.25%), Query Frame = 0
Query:    1 PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEEKGSMLCEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDA-IAGEALDAFRQSFGGDEPD--DTVGGKRKAGTGSGDSVLKKAKGDSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            P+LVALIAQEE T  G Q+ PPG++MI LP++D+VR P              +E    A N+++ + L      +F NPALQRHY  L+A+AL E+++   P+  D T PD E L   +  +A++ F+ S  G+  D  +      KAG       L  A  +  +  +W   A+  ++ + T+  LK+YL + GLP+ GKK  LV+R+  H
Sbjct:   73 PQLVALIAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSDDAPRATDEQIKKASNLLRRIDLKNFSVCQFSNPALQRHYGILEALALGEDEM---PDVKDETLPDEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKRKALTDAAAEKSAAHNWAELADTGKLKDMTVVDLKSYLSAHGLPVSGKKEALVSRILTH 281          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: A0A067LCA6_JATCU (SAP domain-containing protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LCA6_JATCU)

HSP 1 Score: 119 bits (299), Expect = 1.170e-27
Identity = 78/216 (36.11%), Postives = 119/216 (55.09%), Query Frame = 0
Query:    1 PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEEKGSMLCEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDAIAG-EALDAFRQSFGGDEPDDTVGGKRKAGTGSGDSVLKKAK------GDSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            PRLVAL+AQ+E    G Q+ PPG++MI LP++D+VR+      + S +    +E    A  ++K + L      +F NPALQRHYA LQA+AL E+++   P   D T PD E +      +A++ F+ S  GD  D+       AG G G+   +K K      G+ ++K DW   A+  ++ + T+  LK YL +  LP+ GKK  L++R+  H
Sbjct:  415 PRLVALVAQDEILNAGGQVEPPGMHMIFLPYSDDVRDIEEFHSESSEVPRATDEQIKKAAALIKRIDLRDFSVCQFANPALQRHYAMLQALALGEDEM---PESKDETLPDEEGMTRPGVVKAIEEFKLSVYGDNYDEEC---NFAGNGKGNEASRKRKAAAENAGNEYAKYDWAELADNGKLKDLTVADLKIYLTANSLPVAGKKEALISRILTH 624          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: A0A484L7V4_9ASTE (SAP domain-containing protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484L7V4_9ASTE)

HSP 1 Score: 119 bits (298), Expect = 1.640e-27
Identity = 80/215 (37.21%), Postives = 118/215 (54.88%), Query Frame = 0
Query:    2 RLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEEKGSMLCEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALD-AIAGEALDAFRQSFGGDEPDDTVGGKRKAGTGSGDSVLKKAKG------DSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            RLVALIAQ+E T    Q+ PPG++MI LP++D++R           L    +E   AA  ++K + L      +F NPALQRHYA LQA+AL E+++   P+ ND T PD E +  A   +AL+ F+    G+  D+ +    KA T +     KK K         ++K DW   A+  ++ +  +  LK YL + GLP+GGKK  L++R+ NH
Sbjct:  421 RLVALIAQDEITTSRGQIEPPGMHMIFLPYSDDIRHIEELHADSESLPHATDEQIKAASALLKRIDLKDFSVCQFSNPALQRHYAILQALALEEDEM---PDMNDETLPDEEGMSRAGVVKALEEFKVCVYGENYDEEIELASKAKTAATSEASKKRKAIAENAVKEYAKHDWSDLADNGQLKDLAVQELKYYLVAHGLPVGGKKEVLISRILNH 632          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: UPI0011DF004F (ATP-dependent DNA helicase 2 subunit KU70 n=1 Tax=Cannabis sativa TaxID=3483 RepID=UPI0011DF004F)

HSP 1 Score: 119 bits (297), Expect = 2.200e-27
Identity = 82/219 (37.44%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    1 PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEEKGSML---CEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDAIAG-EALDAFRQSFGGDEPDDTVGGKRKAGTGSGDSVLKKAKGDS------HSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            P+LVAL+AQEE  + G Q+ PPG++MI LP++D++R+   NEE  S +   C   E+ + AA +++K + L      +F NPALQRHYA LQA+AL E+++   P+  D T PD E +      +AL+ F+ S  GD  D+       AG        KK K  S      ++K DW   A+  E+ + T+  LK YL +  +P+ GKK  L++R+ +H
Sbjct:  417 PQLVALVAQEEIVKAGGQVEPPGMHMIYLPYSDDIRD---NEELHSSVDAPCATDEQIRKAA-SLIKRIDLRDFSVCQFANPALQRHYAVLQALALEEDEM---PDIKDETVPDEEGMSRPGVVKALEEFKLSIYGDHYDEET---ENAGDKKDSEASKKRKATSEIALQEYAKYDWSKLADNGELKDLTVTELKYYLTANNIPVAGKKEALISRILSH 625          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: UPI000B78556B (ATP-dependent DNA helicase 2 subunit KU70-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78556B)

HSP 1 Score: 111 bits (277), Expect = 1.250e-26
Identity = 78/218 (35.78%), Postives = 119/218 (54.59%), Query Frame = 0
Query:    1 PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVR--EPLNNEEKGSMLCEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDAIAG-EALDAFRQSFGGDEPDDTVGGKRKAGTGSGDSVLKKAKG------DSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            PRLVAL+AQ+E    G Q+ PPG++MI LP+ D+VR  E  ++E    +     +  + AA+ ++K + L      +F NPALQRHYA LQA+AL EE+I   P+  D T PD E +  +   +A++ F+ S  GD+ D+        G G  +   KK K       +  +  DW   A+  ++ + T+  LK YL +  LP+ GKK  L++R+  H
Sbjct:   16 PRLVALVAQDEIISAGGQVEPPGMHMIYLPYTDDVRLIEEFHSESNVRVPRATDDHIKKAAD-LIKRIYLKDFSVCQFANPALQRHYAMLQALALEEEEI---PDTIDETLPDEEGMARLGVVKAIEEFKLSVYGDKYDEE---SNSVGNGKANEASKKRKAAAENAANESANYDWADLADNGQLKDLTVAELKLYLTAHNLPVSGKKEALISRILTH 226          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: KU70_ORYSJ (ATP-dependent DNA helicase 2 subunit KU70 n=18 Tax=Oryzeae TaxID=147380 RepID=KU70_ORYSJ)

HSP 1 Score: 116 bits (291), Expect = 1.420e-26
Identity = 76/212 (35.85%), Postives = 115/212 (54.25%), Query Frame = 0
Query:    1 PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEEKGSMLCEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDA-IAGEALDAFRQSFGGDEPD--DTVGGKRKAGTGSGDSVLKKAKGDSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            P+LVALIAQEE T  G Q+ PPG++MI LP++D+VR P              +E    A N+++ + L      +F NPALQRHY  L+A+AL E+++   P+  D T PD E L   +  +A++ F+ S  G+  D  +      KAG       L  A  +  +  +W   A+  ++ + T+  LK+YL + GLP+ GKK  LV+R+  H
Sbjct:  413 PQLVALIAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSDDAPRATDEQIKKASNLLRRIDLKNFSVCQFSNPALQRHYGILEALALGEDEM---PDVKDETLPDEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKRKALTDAAAEKSAAHNWAELADTGKLKDMTVVDLKSYLSAHGLPVSGKKEALVSRILTH 621          
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Match: A0A166D364_DAUCS (SAP domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166D364_DAUCS)

HSP 1 Score: 110 bits (275), Expect = 2.480e-26
Identity = 82/223 (36.77%), Postives = 125/223 (56.05%), Query Frame = 0
Query:    1 PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEE----KGSMLCEVKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEWDPNKNDTTRPDNEALDAIAG--EALDAFRQSFGGD----EPDDTVGGKRKAGTGSGDSVLKKAKGDSHSK----VDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKADLVARVTNH 209
            P+LVALIAQ+E   GG Q+ PPG++MI LP++D++R   + EE     G       ++    A  +++ + L +    +F NPALQRHYA +QA+AL E+++   P   D T PD E + A  G  +AL+ F+ S  G+    E D  VGGK       G+++ KK K +  +K     DW   A+  ++ + T+P LK YL +  LP+ GKK  L+ R+ +H
Sbjct:   18 PQLVALIAQDEILTGGGQVEPPGMHMIYLPYSDDIR---HTEEVHTYTGGTAPRATDDHVKKATALMRRIDLKEFSVCQFANPALQRHYAMVQAMALDEDEV---PEIADETLPDAEGM-ARPGVVKALEEFKLSIYGENYEEEVDLAVGGK-------GNALAKKRKAEDAAKESTNYDWSELADNGKLKDLTVPELKLYLTAHSLPVAGKKELLINRILSH 226          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7380.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1C1_9PHAE5.510e-5451.90SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2Y142_9STRA5.200e-3541.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZF42_9STRA4.340e-3144.81SPOC like C-terminal domain-containing protein n=1... [more]
B8B7W3_ORYSI3.680e-2835.85SAP domain-containing protein n=3 Tax=Oryza TaxID=... [more]
A0A067LCA6_JATCU1.170e-2736.11SAP domain-containing protein n=2 Tax=Jatropha cur... [more]
A0A484L7V4_9ASTE1.640e-2737.21SAP domain-containing protein n=2 Tax=Cuscuta camp... [more]
UPI0011DF004F2.200e-2737.44ATP-dependent DNA helicase 2 subunit KU70 n=1 Tax=... [more]
UPI000B78556B1.250e-2635.78ATP-dependent DNA helicase 2 subunit KU70-like n=1... [more]
KU70_ORYSJ1.420e-2635.85ATP-dependent DNA helicase 2 subunit KU70 n=18 Tax... [more]
A0A166D364_DAUCS2.480e-2636.77SAP domain-containing protein n=2 Tax=Daucus carot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 176..210
e-value: 0.0049
score: 26.1
IPR003034SAP domainPFAMPF02037SAPcoord: 180..209
e-value: 7.1E-9
score: 35.3
IPR003034SAP domainPROSITEPS50800SAPcoord: 176..210
score: 9.826
NoneNo IPR availableGENE3D1.10.1600.10coord: 32..133
e-value: 8.6E-19
score: 69.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..158
NoneNo IPR availablePANTHERPTHR12604KU AUTOANTIGEN DNA HELICASEcoord: 1..210
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 162..210
e-value: 2.7E-8
score: 35.3
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 164..209
IPR006164Ku70/Ku80 beta-barrel domainPFAMPF02735Kucoord: 1..43
e-value: 9.3E-6
score: 25.4
IPR005160Ku70/Ku80 C-terminal armPFAMPF03730Ku_Ccoord: 74..158
e-value: 7.4E-16
score: 58.6
IPR006165Ku70PANTHERPTHR12604:SF2X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 6coord: 1..210
IPR016194SPOC-like, C-terminal domain superfamilySUPERFAMILY100939SPOC domain-likecoord: 1..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7380contigC-tenellus_contig7380:90..4404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7380.1.1mRNA_C-tenellus_contig7380.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7380 90..4404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7380.1.1 ID=prot_C-tenellus_contig7380.1.1|Name=mRNA_C-tenellus_contig7380.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=214bp
PRLVALIAQEEETEGGLQLSPPGLNMIPLPFADEVREPLNNEEKGSMLCE
VKEESQTAAENVVKALGLAKVECRRFQNPALQRHYAALQAIALSEEDIEW
DPNKNDTTRPDNEALDAIAGEALDAFRQSFGGDEPDDTVGGKRKAGTGSG
DSVLKKAKGDSHSKVDWKAAAEKREVDEYTMPMLKAYLKSVGLPLGGKKA
DLVARVTNHALSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf
IPR006164Ku70/Ku80_beta-barrel_dom
IPR005160Ku_C
IPR006165Ku70
IPR016194SPOC-like_C_dom_sf