prot_C-tenellus_contig7378.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7378.3.1
Unique Nameprot_C-tenellus_contig7378.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length133
Homology
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BLAST of mRNA_C-tenellus_contig7378.3.1 vs. uniprot
Match: D7G030_ECTSI (EXS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G030_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 5.980e-22
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 0 
Query:    1 MSPDDMKELYLASFRAPLIVIVFLGLWGLVMLILQALRIDYESVLIPKPGRLVCAPRLPLPS---TAGNGVVGATSTQMPLWIQVLMMASALLACLLMCIYTTQSWTLTPTAGIGGFYMVLGVGLLMLLQSSAVK 132
            MS D+ +ELYLAS R PL++ VFLGLWGLV+L+LQAL+I++ SVL     R    PRL       T+G G      T  P W QV+  A+  L  LL CI+ ++   + PT  +GGFY +LG  LL+ LQ+ +V+
Sbjct:    2 MSSDEYEELYLASVRVPLVLAVFLGLWGLVILVLQALQIEFSSVL-----RKASGPRLATEDQGDTSGKGKPTRVPTP-PSWRQVVSTAAGFLGVLLACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVR 130
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7378.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G030_ECTSI5.980e-2245.19EXS domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7378contigC-tenellus_contig7378:5508..6633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7378.3.1mRNA_C-tenellus_contig7378.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7378 5505..6633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7378.3.1 ID=prot_C-tenellus_contig7378.3.1|Name=mRNA_C-tenellus_contig7378.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=133bp
MSPDDMKELYLASFRAPLIVIVFLGLWGLVMLILQALRIDYESVLIPKPG
RLVCAPRLPLPSTAGNGVVGATSTQMPLWIQVLMMASALLACLLMCIYTT
QSWTLTPTAGIGGFYMVLGVGLLMLLQSSAVK*
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