prot_C-tenellus_contig7345.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7345.1.1
Unique Nameprot_C-tenellus_contig7345.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length135
Homology
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BLAST of mRNA_C-tenellus_contig7345.1.1 vs. uniprot
Match: D7FQJ2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ2_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 2.240e-45
Identity = 79/135 (58.52%), Postives = 103/135 (76.30%), Query Frame = 0 
Query:    1 MRKKEELIIVDTLLEDGKNEGDLPHLCLDKTLLENSGHSILDPKGLEDVLQLLRKTKRKINRLSLSFNKTEARGVGQFLKADRNVTEVNILCEKVSKESMYSISLALQSNNRVRKLLLGGKELEVEAAQGLGSML 135
            ++KK ELI+VDTLLE+G N+GDLPHLCLDKTLL  SGH  L PK LEDVL  +R+TKRK+N+LS+ FN T  +G+G F+  D +V EV +LCE +S +S+ S++ AL++N  V KLLLGGKEL+  AA  L S+L
Sbjct:   23 IKKKGELIVVDTLLEEGLNDGDLPHLCLDKTLLMGSGHDTLGPKDLEDVLTSVRRTKRKLNKLSVMFNGTGGQGIGNFIAKDTSVREVTVLCEDLSDDSIQSLAEALETNKTVEKLLLGGKELQEGAAAALESVL 157
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7345.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQJ2_ECTSI2.240e-4558.52Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..73
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 38..134
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 7..135
e-value: 3.0E-7
score: 31.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7345contigC-tenellus_contig7345:1630..3104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7345.1.1mRNA_C-tenellus_contig7345.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7345 1630..3104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7345.1.1 ID=prot_C-tenellus_contig7345.1.1|Name=mRNA_C-tenellus_contig7345.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=135bp
MRKKEELIIVDTLLEDGKNEGDLPHLCLDKTLLENSGHSILDPKGLEDVL
QLLRKTKRKINRLSLSFNKTEARGVGQFLKADRNVTEVNILCEKVSKESM
YSISLALQSNNRVRKLLLGGKELEVEAAQGLGSML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf