prot_C-tenellus_contig7344.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7344.3.1
Unique Nameprot_C-tenellus_contig7344.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length194
Homology
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: D8LIM3_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIM3_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 2.690e-32
Identity = 53/81 (65.43%), Postives = 73/81 (90.12%), Query Frame = 0
Query:  101 EDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            EDAPMF+V ++GDEEY R+HV++++QDI+P+ DNT+AA +F+EAQ GG+G CGT+PEE++ELYVEQF RCEP+I+A ME+E
Sbjct:  120 EDAPMFQVLVIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEGGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKE 200          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A836C8I8_9STRA (ClpS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.700e-32
Identity = 62/109 (56.88%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   79 IAKPKVEKKVEXXXXXXVKPK------TEDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            +A+PK E +         KPK      +ED PM+KV LLGDE YER+HV++A+QDIIPE DN K+  +F+EAQ+ G G CG FPEE +ELYV+QF RCEPMI+A MEEE
Sbjct:   42 LAQPKEEAQKAATDGAKAKPKQRRVTESEDCPMYKVLLLGDEGYEREHVIMAIQDIIPETDNKKSTEIFEEAQKTGTGMCGVFPEEHAELYVQQFTRCEPMIYADMEEE 150          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A7S2PG26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG26_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.750e-19
Identity = 41/83 (49.40%), Postives = 62/83 (74.70%), Query Frame = 0
Query:   99 KTEDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            KTEDAP++KV L+GDEEY++ H +  + DI+ ++D  +AA+VF +AQ GG+     +P E +ELYVEQ +R +PMIF+ ++EE
Sbjct:  102 KTEDAPLYKVMLIGDEEYDQTHTIERICDIMEDVDEGQAASVFTQAQNGGKAMIAKYPFEHAELYVEQLLRSDPMIFSELQEE 184          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A7R9Z7A9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7A9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.470e-18
Identity = 38/83 (45.78%), Postives = 60/83 (72.29%), Query Frame = 0
Query:   99 KTEDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            K EDAP++K+ LLGDEEY++ HV+  +  ++ +MD  +A+ +FD+AQ  G+  CG +P E +E+Y EQ  R +PMI++ +EEE
Sbjct:   41 KFEDAPLYKLMLLGDEEYDQAHVIERMCALLEDMDEDQASTIFDQAQISGKAMCGKYPYEHAEMYKEQLARSDPMIYSDLEEE 123          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A7S2VFC1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFC1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 7.210e-18
Identity = 38/81 (46.91%), Postives = 58/81 (71.60%), Query Frame = 0
Query:  101 EDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            +DAPM+K+ LL D+ Y+ +HV+  +  I+ +MD  +AA VF +A + G+  CG FP E++EL+ EQ +R +PMIFA +EEE
Sbjct:   21 QDAPMYKLMLLSDDGYDGEHVVTRMCAIVDDMDEDQAATVFQQAMQNGKAMCGKFPFERAELFKEQLVRSDPMIFADLEEE 101          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A7R9WV01_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WV01_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.850e-15
Identity = 43/106 (40.57%), Postives = 68/106 (64.15%), Query Frame = 0
Query:   79 IAKPKVEKKVEXXXXXXV---KPKTEDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            +AK K+++K +      +   K + EDAPMFK+ LLGD+ Y+  HV+  L  I+ ++D  +AA V  +A   G+  CG +P E++EL+ EQ +R +PMIF+ +EEE
Sbjct:   68 VAKEKIKQKQKAKTHDPISRRKDEFEDAPMFKLMLLGDDGYDAMHVVDRLCAIVDDIDEGQAAEVLQQANMAGKAMCGKYPFERAELFKEQLLRSDPMIFSDLEEE 173          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A1Z5J9C8_FISSO (ClpS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9C8_FISSO)

HSP 1 Score: 79.7 bits (195), Expect = 2.070e-15
Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = 0
Query:  101 EDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            +DAPM+KV LL DE+Y+++HV+  L  I+ +MD  +AA V+ +A   G+  CG +P E++EL+ EQ +R +PMIF  + EE
Sbjct:   83 QDAPMYKVMLLRDEDYDQEHVVTRLCAILDDMDEDQAATVWKQAMAAGQAMCGKYPFERAELFKEQLLRSDPMIFCDLVEE 163          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A7S0AH38_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AH38_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.810e-14
Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 0
Query:  101 EDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            EDAPM+++ LLGDEEY+  HV+  +  I+ +MD   A+ + ++AQ  G+  CG +P E +E+Y EQ  R +P+I++ +EEE
Sbjct:   92 EDAPMYRLMLLGDEEYDIVHVVERMCAILDDMDEDAASTILNQAQIAGKAMCGKYPFEHAEMYKEQLARSDPIIYSDLEEE 172          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A7S1Y2N3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2N3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 9.090e-14
Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = 0
Query:    9 VLVMAAVLTGTSAFLAQPPLGG-------HLRSALPPSQICMPIGRSAGQGSRARTWTCMAAPAKVATTTKTKTAPVIAKPKVEKKVEXXXXXXVKPKTEDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            VL++  + T T  F+ +PP G        H R+++ P  +       AG  S   T           +T K     V A   VEKK E         K ED  M+KV L+GDEEY+  HV+  + +I+ ++D  +A  +   AQ GG+   G +P E +E+Y EQ +R +P+I++ +EEE
Sbjct:    6 VLLVLFIATSTCGFVVRPPTGSSSVITTSHQRTSIQPLFM-------AGPASATETKXXXXXXXXXKSTVK-----VAAGEPVEKKRE---------KFEDPRMWKVLLIGDEEYDDGHVVERITEIMEDIDENRAVQILKAAQAGGKAMIGVYPLEVAEVYKEQLLRSDPLIYSDLEEE 164          
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Match: A0A1E7F5M5_9STRA (ClpS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5M5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.300e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  102 DAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRGHCGTFPEEQSELYVEQFIRCEPMIFAAMEEE 181
            +APM+K+ LLGDE Y+  HV+  +  I+ +MD  +A  V  +A+  G   CG +P E++EL+ EQ IR +PMI++ ++EE
Sbjct:   88 EAPMYKLMLLGDESYDAVHVMERMCAIVDDMDEDQATTVIQQAKSSGEAMCGKYPFEKAELFKEQLIRSDPMIYSEIKEE 167          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7344.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIM3_ECTSI2.690e-3265.43ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C8I8_9STRA2.700e-3256.88ClpS domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2PG26_9STRA2.750e-1949.40Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7R9Z7A9_9STRA2.470e-1845.78Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2VFC1_9STRA7.210e-1846.91Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7R9WV01_9STRA1.850e-1540.57Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1Z5J9C8_FISSO2.070e-1545.68ClpS domain-containing protein n=2 Tax=Fistulifera... [more]
A0A7S0AH38_9STRA2.810e-1443.21Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S1Y2N3_9STRA9.090e-1432.22Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7F5M5_9STRA1.300e-1342.50ClpS domain-containing protein n=1 Tax=Fragilariop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 103..167
e-value: 9.1E-6
score: 25.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 79..180
e-value: 2.3E-12
score: 48.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 99..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7344contigC-tenellus_contig7344:2702..5246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7344.3.1mRNA_C-tenellus_contig7344.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7344 2573..5362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7344.3.1 ID=prot_C-tenellus_contig7344.3.1|Name=mRNA_C-tenellus_contig7344.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=194bp
MISPRDLIVLVMAAVLTGTSAFLAQPPLGGHLRSALPPSQICMPIGRSAG
QGSRARTWTCMAAPAKVATTTKTKTAPVIAKPKVEKKVEVKSRVKVKPKT
EDAPMFKVHLLGDEEYERDHVLLALQDIIPEMDNTKAAAVFDEAQRGGRG
HCGTFPEEQSELYVEQFIRCEPMIFAAMEEETVGSKGGKKKVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like