prot_C-tenellus_contig7337.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7337.1.1
Unique Nameprot_C-tenellus_contig7337.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length176
Homology
BLAST of mRNA_C-tenellus_contig7337.1.1 vs. uniprot
Match: D7FXM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM9_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 5.460e-72
Identity = 113/171 (66.08%), Postives = 131/171 (76.61%), Query Frame = 0
Query:    1 MPSSAFVPFFEIFAEGVVLTVAAITTVSFAGRCLRSTGPLNITGLLASVISTFYSTFALAYWFGG-GEGFNCTRLAAINGTCMSASNGLTFLHLFIKADASNKLNHGW-KYWKWVGVVMTIFNWVTLVTVHSLHTGVMVDGLDGPRCKFTFEEVSFKLKWIAQFCNQVFQV 169
            MPS AF  FFEIF+EGVV TVA IT+V F  RC + + PLNITGL AS+I+  YS FAL YWF G G+ ++C  LAA+NGTCMSASN  TFLHLF+KADASN+ N  W K+++WVGV  T FNWVTL  VH+L  G  +DGLDGPRCKFTFE  SF+LKWIAQF NQ FQV
Sbjct:    1 MPSPAFGLFFEIFSEGVVFTVALITSVCFGERCWKRSAPLNITGLAASLIAVSYSVFALEYWFNGLGDLYDCATLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLQGTEIDGLDGPRCKFTFEMNSFRLKWIAQFINQAFQV 171          
BLAST of mRNA_C-tenellus_contig7337.1.1 vs. uniprot
Match: A0A6H5L5W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W9_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 4.480e-44
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 0
Query:   69 FNCTRLAAINGTCMSASNGLTFLHLFIKADASNKLNHGW-KYWKWVGVVMTIFNWVTLVTVHSLHTGVMVDGLDGPRCKFTFEEVSFKLKWIAQFCNQVFQV 169
            ++CT LAA+NGTCMSASN  TFLHLF+KADASN+ N  W K+++WVGV  T FNWVTL  VH+L  G  VDGLDGPRCKFTFE  SF+LKWIAQF NQ FQV
Sbjct:    2 YSCTTLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLEGTQVDGLDGPRCKFTFEMNSFRLKWIAQFINQAFQV 103          
BLAST of mRNA_C-tenellus_contig7337.1.1 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.880e-31
Identity = 67/177 (37.85%), Postives = 93/177 (52.54%), Query Frame = 0
Query:    1 MPSSAFVPFFEIFAEGVVLTVAAITTVSFAGRC-LRSTGPLNITGLLASVISTFYSTFALAYWFGGGEGFNCTRLAAINGTCMSASNGLTFLHLFIKADASNKLNHGWKYWKWVGVVMTIFNWVTLVTVHSLHTGVMVDGLDGPRCKFTFEEVSFKLKWIAQFCNQV-FQVWLTCPL 175
            M    F  +FE         +A      F  RC LR    +NITG +AS+I+  Y    L Y++ G E  +C +L  I G    +SN L FLHLF++ADA NK+N  W+ W+W G+ +T  NW TL+ V    T V+       RCKFTF++ +F+ KW+ Q  N V F +    PL
Sbjct:    1 MTEGQFFAYFETTCLTTTFIIALEVGWFFGERCVLRKANAMNITGFMASLIAVTYCFLKLIYFYTGAEELSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRPWRWFGIALTALNWATLLAVCFTRTAVLATS-GSQRCKFTFDQSTFEAKWVVQLLNHVVFSMMFVFPL 176          
BLAST of mRNA_C-tenellus_contig7337.1.1 vs. uniprot
Match: A0A835ZKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKC7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.050e-30
Identity = 68/156 (43.59%), Postives = 95/156 (60.90%), Query Frame = 0
Query:    6 FVPFFEIFAEGVVLTVAAITTVSFAGRCL-RSTGPLNITGLLASVISTFYSTFALAYWFGGGEGFNCTRLAAINGTCMSASNGLTFLHLFIKADASNKLNHGWKYWKWVGVVMTIFNWVTLVTVHSLHTGVMVDG--LDGP-RCKFTFEEVSFKLK 157
            F  + EI++  V   V   TT +F  R   +    +N+TGLLASV++ F+ST+A+  WF G    +C  +  +NG C+S+SN L F+HLF+KADASNKLN  W  W+   ++  + NW+ LV VH+L T        L G  RCK+TFEE +FKLK
Sbjct:    7 FPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162          
BLAST of mRNA_C-tenellus_contig7337.1.1 vs. uniprot
Match: A0A835Z900_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z900_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.610e-23
Identity = 68/173 (39.31%), Postives = 88/173 (50.87%), Query Frame = 0
Query:    3 SSAFVPFFEIFAEGVVLTVAAITTVSFAGRCL-RSTGPLNITGLLASVISTFYSTFALAYWFGGGEGFNCTRLAAINGTCMSASNGLTFLHLFIKADASNKLNHGWKYWKWVGVVMTIFNWVTLVTVHSLHTGVMVDG--LDGP-RCKFTFEEVSFKLKWIAQFCNQVFQVWL 171
            S+AFVP FE+FA  V L +A  TTV+F  R L R+   LN+TGLLAS +S FY+ +AL  WF G  G +CT +  +NG C+S+SN L                                  V LV VH+L +G       L G  RC +TFEE +FKLKW+ Q  N +    L
Sbjct:    4 STAFVPLFEVFALTVTLMIALQTTVAFGKRYLSRNRALLNLTGLLASFLSLFYTLWALTIWFCGIGGLSCTVIQVVNGMCLSSSNALA---------------------------------VVLVAVHTLLSGYAAPNTALGGEERCVWTFEEATFKLKWLVQLFNHILMAGL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7337.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXM9_ECTSI5.460e-7266.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5W9_9PHAE4.480e-4470.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z9N7_9STRA1.880e-3137.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKC7_9STRA1.050e-3043.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z900_9STRA1.610e-2339.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7337contigC-tenellus_contig7337:4769..5914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7337.1.1mRNA_C-tenellus_contig7337.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7337 4359..6686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7337.1.1 ID=prot_C-tenellus_contig7337.1.1|Name=mRNA_C-tenellus_contig7337.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=176bp
MPSSAFVPFFEIFAEGVVLTVAAITTVSFAGRCLRSTGPLNITGLLASVI
STFYSTFALAYWFGGGEGFNCTRLAAINGTCMSASNGLTFLHLFIKADAS
NKLNHGWKYWKWVGVVMTIFNWVTLVTVHSLHTGVMVDGLDGPRCKFTFE
EVSFKLKWIAQFCNQVFQVWLTCPL*
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