prot_C-tenellus_contig7329.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7329.3.1
Unique Nameprot_C-tenellus_contig7329.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length107
Homology
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 5.720e-53
Identity = 89/104 (85.58%), Postives = 93/104 (89.42%), Query Frame = 0
Query:    4 AEDAPRVAPTKLQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQV 107
            A+ AP   P +LQPWVEKYRPKTVDDVAHQDEVT TLK AI TGVLPHLLFYGPPGTGKTSTVLALARTLFGPD Y+DRILELNASDERGI VVREK+K FAQV
Sbjct:   19 AQQAP---PARLQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQV 119          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A836CA10_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA10_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.000e-47
Identity = 79/100 (79.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:    8 PRVAPT-KLQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQ 106
            P VAP    +PWVEKYRP+TVDD+A+QDEV +TLK AI+TGV+PHLLFYGPPGTGKTST+LA+ARTLFGP++Y+ RILELNASDERGI VVREKVKNFAQ
Sbjct:   12 PAVAPAVHTKPWVEKYRPRTVDDIAYQDEVVKTLKKAISTGVMPHLLFYGPPGTGKTSTILAVARTLFGPEMYRTRILELNASDERGIKVVREKVKNFAQ 111          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A7S4DH62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH62_HETAK)

HSP 1 Score: 163 bits (413), Expect = 2.630e-47
Identity = 76/91 (83.52%), Postives = 85/91 (93.41%), Query Frame = 0
Query:   16 QPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQ 106
            QPWVEKYRPKTVDD+AHQDEV +TLK AI TGVLPHLLFYGPPGTGKTST+LA+A+TLFGP+IY+ R+LELNASDERGI V+REKVK FAQ
Sbjct:   16 QPWVEKYRPKTVDDIAHQDEVVKTLKNAIDTGVLPHLLFYGPPGTGKTSTILAVAKTLFGPEIYRARVLELNASDERGIKVIREKVKGFAQ 106          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: W7TMJ2_9STRA (Dna replication factor c subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMJ2_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.410e-44
Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 0
Query:   13 TKLQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQ 106
            TK+QPWVEKYRP+ VDD+++QDEV +TLK AI TG LPHLLFYGPPGTGKTST+LA+AR+LFGP+ Y+ RILELNASDERGI VVREKVK FAQ
Sbjct:   21 TKVQPWVEKYRPQGVDDISYQDEVVKTLKNAIQTGTLPHLLFYGPPGTGKTSTILAVARSLFGPE-YRSRILELNASDERGIKVVREKVKQFAQ 113          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A7S3GY06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GY06_9STRA)

HSP 1 Score: 152 bits (383), Expect = 3.120e-44
Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 0
Query:   17 PWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQ 106
            PWVEKYRP  VDDVAHQDEV QTLK +I  G LPHL+F+GPPGTGKT+T+LA+AR L+GPD+YK R+LELNASDERGISVVREK+K FAQ
Sbjct:   25 PWVEKYRPAKVDDVAHQDEVVQTLKKSIELGTLPHLMFHGPPGTGKTTTILAVARALYGPDLYKSRVLELNASDERGISVVREKIKTFAQ 114          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A4D9CQY7_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQY7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.990e-43
Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 0
Query:   13 TKLQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQ 106
            TK+QPWVEKYRP+ VDD+++QDEV +TLK AI TG LPHLLFYGPPGTGKTST+LA+AR+LFGP+ Y+ RILELNASDERGI VVREKVK FAQ
Sbjct:   21 TKVQPWVEKYRPQGVDDISYQDEVVKTLKNAIQTGTLPHLLFYGPPGTGKTSTILAVARSLFGPE-YRSRILELNASDERGIKVVREKVKQFAQ 113          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A0D2MDH4_9CHLO (Replication factor C subunit 2/4 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MDH4_9CHLO)

HSP 1 Score: 144 bits (363), Expect = 3.150e-42
Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = 0
Query:   13 TKLQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFA 105
            T  QPWVEKYRP+ VD+VAHQ+EV  TLK ++ T  LPHLLFYGPPGTGKTST LA+AR L+GP++ K R++ELNASDERGISVVR+KVK+FA
Sbjct:    2 TVAQPWVEKYRPRNVDEVAHQEEVVSTLKKSLETANLPHLLFYGPPGTGKTSTALAIARQLYGPELMKTRVMELNASDERGISVVRQKVKSFA 94          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A8H4VM74_9AGAR (ATPase_AAA_core domain-containing protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4VM74_9AGAR)

HSP 1 Score: 144 bits (363), Expect = 3.350e-42
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 0
Query:   15 LQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQ 106
            LQPWVEKYRPKT+DDV+ Q+     L+  +T+  LPH+LFYGPPGTGKTST+LALAR LFGPD +K+R+LELNASDERGIS+VREK+KNFA+
Sbjct:   25 LQPWVEKYRPKTIDDVSAQEHTVAILRKTLTSTNLPHMLFYGPPGTGKTSTILALARQLFGPDNFKNRVLELNASDERGISIVREKIKNFAR 116          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: D3B3W9_POLPP (Replication factor C subunit n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B3W9_POLPP)

HSP 1 Score: 150 bits (378), Expect = 5.040e-42
Identity = 68/91 (74.73%), Postives = 81/91 (89.01%), Query Frame = 0
Query:   15 LQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFA 105
            ++PWV KYRPKTVD+V+HQDEV + LK ++ TG LPHLLFYGPPGTGKTST+LA+A  LFGP++YKDR+LELNASDERGI VVR K+KNFA
Sbjct:   14 VEPWVNKYRPKTVDEVSHQDEVVKALKRSLETGNLPHLLFYGPPGTGKTSTILAVAMDLFGPELYKDRVLELNASDERGIEVVRTKIKNFA 104          
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Match: A0A6F9DQ19_9ASCI (Replication factor C subunit 4-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DQ19_9ASCI)

HSP 1 Score: 149 bits (375), Expect = 1.290e-41
Identity = 69/95 (72.63%), Postives = 83/95 (87.37%), Query Frame = 0
Query:   13 TKLQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLPHLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREKVKNFAQV 107
            TK +PWVEKYRPK+VDDVAHQDEV   L+ ++T   LP+LLFYGPPGTGKTST+LAL+  LFGP++YK+R+LELNASDERGI V+REKVK FAQ+
Sbjct:   26 TKNKPWVEKYRPKSVDDVAHQDEVVAVLRKSLTGADLPNLLFYGPPGTGKTSTILALSHELFGPELYKERVLELNASDERGIDVIREKVKKFAQL 120          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7329.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEB4_9PHAE5.720e-5385.58AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CA10_9STRA2.000e-4779.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4DH62_HETAK2.630e-4783.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TMJ2_9STRA1.410e-4478.72Dna replication factor c subunit n=1 Tax=Nannochlo... [more]
A0A7S3GY06_9STRA3.120e-4477.78Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9CQY7_9STRA1.990e-4378.72AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A0D2MDH4_9CHLO3.150e-4272.04Replication factor C subunit 2/4 n=1 Tax=Monoraphi... [more]
A0A8H4VM74_9AGAR3.350e-4271.74ATPase_AAA_core domain-containing protein n=1 Tax=... [more]
D3B3W9_POLPP5.040e-4274.73Replication factor C subunit n=1 Tax=Polysphondyli... [more]
A0A6F9DQ19_9ASCI1.290e-4172.63Replication factor C subunit 4-like n=1 Tax=Phallu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 11..107
e-value: 2.8E-31
score: 110.5
NoneNo IPR availablePFAMPF03215Rad17coord: 14..73
e-value: 1.1E-8
score: 35.2
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 13..107
NoneNo IPR availablePANTHERPTHR11669:SF20REPLICATION FACTOR C SUBUNIT 4coord: 13..107
NoneNo IPR availableCDDcd00009AAAcoord: 33..105
e-value: 2.05403E-15
score: 65.2451
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7329contigC-tenellus_contig7329:4035..6567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7329.3.1mRNA_C-tenellus_contig7329.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7329 4035..6567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7329.3.1 ID=prot_C-tenellus_contig7329.3.1|Name=mRNA_C-tenellus_contig7329.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=107bp
MLNAEDAPRVAPTKLQPWVEKYRPKTVDDVAHQDEVTQTLKTAITTGVLP
HLLFYGPPGTGKTSTVLALARTLFGPDIYKDRILELNASDERGISVVREK
VKNFAQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase