prot_C-tenellus_contig7317.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig7317.1.1
Unique Name	prot_C-tenellus_contig7317.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	251

Homology

[Close]

BLAST of mRNA_C-tenellus_contig7317.1.1 vs. uniprot
Match: A0A6H5KV72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV72_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 5.860e-32
Identity = 105/274 (38.32%), Postives = 129/274 (47.08%), Query Frame = 0

Query:   28 ECLWWATRDGSHVAIVGGYDGQVHFVDLEHMNVWTMAPPGPSTPRGAVASLTIAT-LARSNAETIPQQSPPPPQTP-----------------------------------PHT-LPRHLVVVLDQGAVFIILLERG----------------VATVDKGS----DGAAGGDGVVVNGGGGPDEGRK------GMVETEYVRLRADCSGDLDFAPAWLDVGRGGGGSGGE-FGVRVVSQA-PGGDGGGGEG--LHISVVSRAWGNKCTVKVLRL 234
            ECLWW TR G+H A++G  DG+VHF+DLE ++ W +APP PS  RG V +L I T LA ++         PPP+                                      HT LPRHLV VL  GAVFI+LLERG                     KG     DG +  D +    G G D          G +  +YV L AD +    F+P WLDVGRGG        GVRV+    P GDGG G    L +S+VSRAWGNKC VK+LR+
Sbjct:  298 ECLWWVTRSGNHFAVIGDPDGEVHFLDLEGLDAWVIAPPLPSMARGRVCALDIVTDLAGTSGA-------PPPRAQRTGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHTSLPRHLVAVLHTGAVFIVLLERGHPDDGVGDXXXXXXXXAKNAVKGEAGEEDGKSSCDHIGKVDGHGRDSSSSSSSNSPGCLGQQYVCLGADTADQPAFSPVWLDVGRGGXXXXXXXMGVRVIPPLYPPGDGGXGSSIRLRMSIVSRAWGNKCAVKILRV 564

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig7317.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig7317.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KV72_9PHAE	5.860e-32	38.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..106
None	No IPR available	SUPERFAMILY	69322	Tricorn protease domain 2	coord: 24..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig7317	contig	C-tenellus_contig7317:12..1850 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig7317.1.1	mRNA_C-tenellus_contig7317.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig7317 12..1850 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig7317.1.1 ID=prot_C-tenellus_contig7317.1.1|Name=mRNA_C-tenellus_contig7317.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=251bp
GGRGKGAEGGGGKGPRSRKESLTQGRVECLWWATRDGSHVAIVGGYDGQV
HFVDLEHMNVWTMAPPGPSTPRGAVASLTIATLARSNAETIPQQSPPPPQ
TPPHTLPRHLVVVLDQGAVFIILLERGVATVDKGSDGAAGGDGVVVNGGG
GPDEGRKGMVETEYVRLRADCSGDLDFAPAWLDVGRGGGGSGGEFGVRVV
SQAPGGDGGGGEGLHISVVSRAWGNKCTVKVLRLEARTAAAVVAAGAVSA
G