prot_C-tenellus_contig7314.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7314.3.1
Unique Nameprot_C-tenellus_contig7314.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length62
Homology
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: D8LCK6_ECTSI (Protein transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 4.680e-19
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 MDSWDIRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQCQDRVGWWDKGRCRG 62
            M+ WD+ G+EERD++RFSWNVWPSSRLEATR+VVPVGCLYTPMK          +D  RC G
Sbjct:    1 MEVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNG 62          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A7S4D7Q8_HETAK (Protein transport protein SEC23 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7Q8_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 1.500e-18
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MDSWDIRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQCQDRVGWWDKGRCRG 62
            M+ WD+  +EERD  RFSWNVWPSS+LEATR+VVP+GCLYTP+K  +       +D  RC G
Sbjct:    1 MEGWDVHAAEERDGARFSWNVWPSSKLEATRIVVPLGCLYTPLKKIEGMPPALAYDPIRCNG 62          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A482RVW2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVW2_9ARCH)

HSP 1 Score: 78.2 bits (191), Expect = 9.560e-18
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MDSWDIRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQCQDRVGWWDKGRCRG 62
            M  WD  G E+RD +RFSWNVWP++RLEATR+V P+GC+Y+P+K  +       +D  RC G
Sbjct:    1 MQQWDFYGPEQRDGVRFSWNVWPTTRLEATRIVAPIGCMYSPLKKIEGMPDSLAYDPIRCNG 62          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A7S2Y1K9_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.340e-17
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MDSWDIRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQCQDRVGWWDKGRCRG 62
            M+ WD   +EERD  RFSWNVWPSSRLEATR+VVPVGCLYTP+K  +       +D  RC G
Sbjct:    1 MEGWDWGAAEERDGARFSWNVWPSSRLEATRIVVPVGCLYTPLKRLENMPPPLAYDPIRCNG 62          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A835YT42_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.860e-17
Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    4 WDIRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQCQDRVGWWDKGRCRG 62
            WD++G+EERD +RFSWNVWPSS+LEATR+VVP GCLY+P+K  +       +D  RC G
Sbjct:   10 WDLQGNEERDGVRFSWNVWPSSKLEATRIVVPTGCLYSPLKRLEGMPPALAYDPIRCNG 68          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A7D9JDQ7_PARCT (Protein transport protein SEC23 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JDQ7_PARCT)

HSP 1 Score: 75.5 bits (184), Expect = 1.980e-16
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    6 IRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMK 44
            I+ +E+RD +RFSWNVWPSSRLEATRMVVPVGC+YTP+K
Sbjct:    8 IQQNEDRDGVRFSWNVWPSSRLEATRMVVPVGCMYTPLK 46          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A0L0F7J6_9EUKA (Protein transport protein SEC23 (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0F7J6_9EUKA)

HSP 1 Score: 73.2 bits (178), Expect = 9.640e-16
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    6 IRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQ 47
            I  +E+RD IRFSWNVWPSSRLEA R++VP+GCLYTP+K  +
Sbjct:    8 IEDNEDRDGIRFSWNVWPSSRLEAQRLIVPIGCLYTPLKAKE 49          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: T1HWT2_RHOPR (Protein transport protein SEC23 n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HWT2_RHOPR)

HSP 1 Score: 74.3 bits (181), Expect = 1.380e-15
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    6 IRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMK 44
            I+ SEERD IRF+WNVWPSSRLEATR+VVPVGCLY P+K
Sbjct:    8 IQQSEERDGIRFTWNVWPSSRLEATRLVVPVGCLYQPLK 46          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A7S3HKU0_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKU0_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.130e-15
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    1 MDSWDIRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQCQDRVGWWDKGRCRG 62
               WD  G E+RD IR SWN WPSSR+EATR+VVP+GCLY+P+K  +       +D  RC G
Sbjct:    2 QQQWDFHGPEQRDGIRNSWNTWPSSRIEATRIVVPLGCLYSPLKRIENMPGSLAYDPIRCNG 63          
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Match: A0A3B3CQ01_ORYME (Protein transport protein SEC23 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B3CQ01_ORYME)

HSP 1 Score: 72.0 bits (175), Expect = 2.840e-15
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    6 IRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMK 44
            I  +EERD IRFSWNVWPSSRLEATRMVVPVG L+TP+K
Sbjct:    8 IAQNEERDGIRFSWNVWPSSRLEATRMVVPVGALFTPLK 46          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7314.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK6_ECTSI4.680e-1964.52Protein transport protein SEC23 n=2 Tax=Ectocarpus... [more]
A0A7S4D7Q8_HETAK1.500e-1858.06Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A482RVW2_9ARCH9.560e-1851.61Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2Y1K9_9STRA1.340e-1761.29Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A835YT42_9STRA6.860e-1759.32Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
A0A7D9JDQ7_PARCT1.980e-1679.49Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A0L0F7J6_9EUKA9.640e-1669.05Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
T1HWT2_RHOPR1.380e-1582.05Protein transport protein SEC23 n=1 Tax=Rhodnius p... [more]
A0A7S3HKU0_9STRA2.130e-1553.23Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A3B3CQ01_ORYME2.840e-1582.05Protein transport protein SEC23 n=2 Tax=Percomorph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1670coord: 4..60
e-value: 5.1E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR11141:SF10PROTEIN TRANSPORT PROTEIN SEC23Bcoord: 6..45
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 5..47
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 6..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7314contigC-tenellus_contig7314:4627..4812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7314.3.1mRNA_C-tenellus_contig7314.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7314 4627..4812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7314.3.1 ID=prot_C-tenellus_contig7314.3.1|Name=mRNA_C-tenellus_contig7314.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=62bp
MDSWDIRGSEERDSIRFSWNVWPSSRLEATRMVVPVGCLYTPMKVSQCQD
RVGWWDKGRCRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037364Sec23