prot_C-tenellus_contig7251.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7251.1.1
Unique Nameprot_C-tenellus_contig7251.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length179
Homology
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BLAST of mRNA_C-tenellus_contig7251.1.1 vs. uniprot
Match: D7G2C6_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C6_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 8.030e-40
Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 0 
Query:   71 DEVQVELEWINGYLFLVLHDPIATEWIINLVNRYMHGPIPMKVESCRADVVKMCLSPSRLWQIGSLETEATGIRTFGRRTHEDEWDEGLYYRKAVRFRRWHADYITSLV 179
            +E +V++EW  G LFLVL   +A++++INLVNRYMHGPIPMKVESCRA++++ CLSPS++ + GS +    G+RTFGRRTHEDEWDE  YY KA+RF RW ADY+ SL+
Sbjct:  179 NERRVDVEWEGGQLFLVLRRAVASDFLINLVNRYMHGPIPMKVESCRAEMLRACLSPSQILRQGSFQATVVGLRTFGRRTHEDEWDESFYYEKALRFHRWAADYVQSLI 287
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BLAST of mRNA_C-tenellus_contig7251.1.1 vs. uniprot
Match: A0A6H5KZA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA2_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 4.750e-34
Identity = 63/124 (50.81%), Postives = 86/124 (69.35%), Query Frame = 0 
Query:   72 EVQVELEWINGYLFLVLHDPIATEWIINLVNRYMHGPIPMKVESCRADVVKMCLSPSRLWQIGSLETEATGIRTFGRRTHEDEWDE----------------GLYYRKAVRFRRWHADYITSLV 179
            E +V++EW  G LFLVL   +A++++I+L+NRYMHGPIPMKVESCR ++++ CLSPS++ + GS +    G+RTFGRRTHEDEWDE                  YY KA+RF RW AD++ SL+
Sbjct:  173 ERRVDVEWEGGQLFLVLRRAVASDFLIDLINRYMHGPIPMKVESCRVEMLRACLSPSQILRQGSFQATVVGLRTFGRRTHEDEWDEVQRPAYRDALPFASLPSFYYEKALRFHRWAADHVQSLI 296
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BLAST of mRNA_C-tenellus_contig7251.1.1 vs. uniprot
Match: A0A836C889_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C889_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.660e-23
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 0 
Query:   93 ATEWIINLVNRYMHGPIPMKVESCRADVVKMCLSPSRLWQIGSLETEATGIRTFGRRTHEDEWDEGLYYRKAVRFRRWHADYI 175
            A+E  INL+N YMHGPIP KVE+   D V++ L P   W+ GS+  +ATG+R+ GRRTHEDEWDE  Y  KAV +RRW ADY+
Sbjct:  101 ASERAINLINHYMHGPIPTKVEAISFDTVRIPLLPLAAWRRGSIAAQATGLRSTGRRTHEDEWDEARYLAKAVAYRRWTADYV 183
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7251.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2C6_ECTSI8.030e-4061.47C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KZA2_9PHAE4.750e-3450.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C889_9STRA2.660e-2357.83C2 domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7251contigC-tenellus_contig7251:1079..4999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7251.1.1mRNA_C-tenellus_contig7251.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7251 1079..5423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7251.1.1 ID=prot_C-tenellus_contig7251.1.1|Name=mRNA_C-tenellus_contig7251.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=179bp
MAPLLNVLTPVGSAIAVAALSMSNGSIHGFVVAVFVLVLLFVWGAGRALM
PGIMATIARSIVQVTRCVDMDEVQVELEWINGYLFLVLHDPIATEWIINL
VNRYMHGPIPMKVESCRADVVKMCLSPSRLWQIGSLETEATGIRTFGRRT
HEDEWDEGLYYRKAVRFRRWHADYITSLV
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