prot_C-tenellus_contig723.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig723.1.1
Unique Nameprot_C-tenellus_contig723.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length144
Homology
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: D8LQ09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ09_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 4.570e-32
Identity = 64/131 (48.85%), Postives = 91/131 (69.47%), Query Frame = 0
Query:    1 MRNKHRFLVARISG-SLEDTAKLSERDVLGELKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQAYARAYKLQGLSEEQARTLL 130
            +R KHR+LVA I+  S E  A+L   ++L  L+ESI  NFG+FG GS    LQVRS D +SGVC+IRA  ++HRMV  SLT+++  +   +++ V+A AGC+RTLK AA++AY R Y+  G+S++ A  LL
Sbjct:    2 VRFKHRYLVATIAAASQERIAELGPSEILAMLRESIEANFGDFGSGSTSQSLQVRSFDRTSGVCVIRAGRESHRMVRASLTLLSGTKDARLSVTVKAVAGCDRTLKAAAVEAYTRGYRRAGISDDAAAALL 132          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: A9SHD8_PHYPA (Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SHD8_PHYPA)

HSP 1 Score: 77.4 bits (189), Expect = 2.720e-15
Identity = 34/110 (30.91%), Postives = 66/110 (60.00%), Query Frame = 0
Query:    4 KHRFLVARI---SGSLEDTAKLSERDVLGELKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQ 110
            K+R++V  +    G      K+++ DV   ++ES+L+NFG +G+ S+ P LQV+ V+  +G+C++R+S   +R +W ++T +  +R+ P+  N+   +G     + AA Q
Sbjct:    5 KNRYMVLEMVVGHGLRLADVKITQNDVASAIQESLLVNFGEYGLASSLPSLQVKYVNGGTGICVVRSSRKQYRTIWAAITFVTEIRKLPLVFNLLDLSGSTSACRRAAQQ 114          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: V4KYJ2_EUTSA (Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KYJ2_EUTSA)

HSP 1 Score: 76.3 bits (186), Expect = 8.160e-15
Identity = 40/123 (32.52%), Postives = 70/123 (56.91%), Query Frame = 0
Query:   24 ERDVLGE--------------LKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQAYARAYK---LQGLSEEQARTL 129
            ++D+LGE              +K+SIL+NFG  G+GS+    QV+ V+P + +CI+R+S + HR VW ++T++ ++   P+  N+   +GC R  K  A++     +K    + LSEE+ R +
Sbjct:   18 DKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQVKHVNPVTKLCIVRSSREEHRQVWSAITLVKSIGNCPVVFNLLDNSGCIRACKDTALKCETEKFKQISTKSLSEEEIREM 140          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: A0A7I4F4Q3_PHYPA (Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4F4Q3_PHYPA)

HSP 1 Score: 73.9 bits (180), Expect = 2.820e-14
Identity = 30/94 (31.91%), Postives = 60/94 (63.83%), Query Frame = 0
Query:    4 KHRFLVARI---SGSLEDTAKLSERDVLGELKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINV 94
            K+R++V  +    G      K+++ DV   ++ES+L+NFG +G+ S+ P LQV+ V+  +G+C++R+S   +R +W ++T +  +R+ P+  N+
Sbjct:    5 KNRYMVLEMVVGHGLRLADVKITQNDVASAIQESLLVNFGEYGLASSLPSLQVKYVNGGTGICVVRSSRKQYRTIWAAITFVTEIRKLPLVFNL 98          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: POP5_ARATH (Probable ribonuclease P/MRP protein subunit POP5 n=6 Tax=Camelineae TaxID=980083 RepID=POP5_ARATH)

HSP 1 Score: 73.9 bits (180), Expect = 6.220e-14
Identity = 38/122 (31.15%), Postives = 72/122 (59.02%), Query Frame = 0
Query:   24 ERDVLGE--------------LKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQAYARAYKL--QGLSEEQARTL 129
            ++D+LGE              +K+SIL+NFG  G+GS+    QV+ V+P + +CI+R+S + HR VW+++T++ ++   P+ +N+   +GC R  +  A++     ++   + LSEE+ R +
Sbjct:   18 DKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQVKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCDKEKFEQCSKSLSEEEIRQM 139          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: A0A2I0VK40_9ASPA (Ribonuclease P/MRP protein subunit POP5 n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0VK40_9ASPA)

HSP 1 Score: 73.9 bits (180), Expect = 6.660e-14
Identity = 37/113 (32.74%), Postives = 69/113 (61.06%), Query Frame = 0
Query:    4 KHRFLVARI------SGSLEDTAKLSERDVLGELKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQ 110
            K+R+LV  +        S  D   ++E ++L  +K+SIL+NFG  G+  +   LQV+ V+PS+ +CI+R S D ++ +W ++TM+ ++ + P+  N+ A +G  +  K AA++
Sbjct:    5 KNRYLVIEVLINGGKDSSGNDPIIITEYNLLKAIKDSILLNFGECGLALSLGSLQVKYVNPSTKLCIMRTSRDDYQKIWSAMTMVKSIGKCPVTFNLLALSGTMKACKSAALK 117          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: V4NYP9_EUTSA (Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4NYP9_EUTSA)

HSP 1 Score: 72.8 bits (177), Expect = 1.070e-13
Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = 0
Query:   24 ERDVLGE--------------LKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLK 105
            ++D+LGE              +K+SIL+NFG  G+GS+   L+V+ V+P + +CI+R+S D HR VW ++T++ ++   P+ +N+   +GC R  K
Sbjct:   18 DKDLLGEGTPIILTKFNLSEAIKDSILVNFGECGLGSSLGSLEVKYVNPITKLCIVRSSRDDHRQVWSAMTLVRSIGNCPVILNLLYISGCIRACK 113          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: UPI0019D66CE1 (probable ribonuclease P/MRP protein subunit POP5 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D66CE1)

HSP 1 Score: 70.9 bits (172), Expect = 8.200e-13
Identity = 32/93 (34.41%), Postives = 60/93 (64.52%), Query Frame = 0
Query:   18 DTAKLSERDVLGELKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQ 110
            D   L++ +V   +++SI +NFG FG+ ++   LQV+ V+P + +CIIR S D H+ VW ++TM+ ++ + P++ N+   +G  R  + AA++
Sbjct:   15 DPVILTQFNVTKVIRDSIQLNFGQFGLAASLGALQVKYVNPVTKLCIIRVSRDDHQKVWTAITMVRSIGKIPVSFNLLDVSGSIRACRTAALE 107          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: A0A443PFE5_9MAGN (Putative ribonuclease P/MRP protein subunit POP5 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PFE5_9MAGN)

HSP 1 Score: 70.9 bits (172), Expect = 1.020e-12
Identity = 36/104 (34.62%), Postives = 61/104 (58.65%), Query Frame = 0
Query:    7 FLVARISGSLEDTAKLSERDVLGELKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQ 110
            FL A       D   +++ +V   + +SIL+NFG  G+GS+    QV+ V+P + VC+IRAS + H+ VW ++TM+ ++   P+  N+   +G  R  K AA++
Sbjct:   14 FLDANRDLDKADPIIITQYNVTRAINDSILVNFGECGLGSSLGSFQVKYVNPITKVCVIRASREEHQKVWSAITMVRSIVNCPVIFNLLDLSGSIRACKTAALK 117          
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Match: A0A087HL03_ARAAL (Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HL03_ARAAL)

HSP 1 Score: 70.5 bits (171), Expect = 1.350e-12
Identity = 38/114 (33.33%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    4 KHRFLVARI-----SGSLEDTAK--LSERDVLGELKESILINFGNFGIGSAYPMLQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGCNRTLKFAAMQ 110
            K+RF++  I     +  L +T+   L++ ++   ++ESI INFG  G+GSA     V+ V+  + +CI+R+S D HR VW ++T++ ++   P+  N+    GC RT K  A++
Sbjct:    5 KNRFMLMEIYLNPDNDILGETSPIILTKLNIKTAIEESIRINFGECGLGSALGSFDVKHVNEITKLCIVRSSRDDHRQVWSAMTLVKSIGNYPVIFNLLDVTGCVRTCKETALK 118          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig723.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ09_ECTSI4.570e-3248.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A9SHD8_PHYPA2.720e-1530.91Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Ph... [more]
V4KYJ2_EUTSA8.160e-1532.52Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Eu... [more]
A0A7I4F4Q3_PHYPA2.820e-1431.91Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Ph... [more]
POP5_ARATH6.220e-1431.15Probable ribonuclease P/MRP protein subunit POP5 n... [more]
A0A2I0VK40_9ASPA6.660e-1432.74Ribonuclease P/MRP protein subunit POP5 n=2 Tax=Ep... [more]
V4NYP9_EUTSA1.070e-1335.42Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Eu... [more]
UPI0019D66CE18.200e-1334.41probable ribonuclease P/MRP protein subunit POP5 n... [more]
A0A443PFE5_9MAGN1.020e-1234.62Putative ribonuclease P/MRP protein subunit POP5 n... [more]
A0A087HL03_ARAAL1.350e-1233.33Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Ar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002759RNase P subunit Pop5/Rpp14/Rnp2-likePFAMPF01900RNase_P_Rpp14coord: 6..105
e-value: 6.4E-17
score: 61.7
IPR038085RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamilyGENE3D3.30.70.3250Ribonuclease P, Pop5 subunitcoord: 1..114
e-value: 1.3E-20
score: 75.5
IPR038085RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 1..105
NoneNo IPR availablePANTHERPTHR10993:SF12RIBONUCLEASE P/MRP PROTEIN SUBUNIT POP5coord: 2..115
NoneNo IPR availablePANTHERPTHR10993OCTANOYLTRANSFERASEcoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig723contigC-tenellus_contig723:3139..4561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig723.1.1mRNA_C-tenellus_contig723.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig723 2613..4645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig723.1.1 ID=prot_C-tenellus_contig723.1.1|Name=mRNA_C-tenellus_contig723.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=144bp
MRNKHRFLVARISGSLEDTAKLSERDVLGELKESILINFGNFGIGSAYPM
LQVRSVDPSSGVCIIRASHDTHRMVWISLTMMNNLRRKPIAINVEATAGC
NRTLKFAAMQAYARAYKLQGLSEEQARTLLHEKEAELNLASLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002759Pop5/Rpp14/Rnp2-like
IPR038085Rnp2-like_sf