prot_C-tenellus_contig7181.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7181.1.1
Unique Nameprot_C-tenellus_contig7181.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length232
Homology
[Close]
BLAST of mRNA_C-tenellus_contig7181.1.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 3.170e-17
Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 0 
Query:   32 CGPFGGTLTSFKTIDGMNQTLGDYDQSSPAAMKGWNKERFLRQTLVIRYIDKANDRVEEVSAFIEPNESSKNLYKVAAAIEASKTLTVKDWLAAKSKPTPGAFGAF-NFTHEAIIMSTVFSGTPYRASLGVLVLVSLIISIVTKSA 176
            C P GGTL S K I+G+ QTLGD+D  S   M  W+K RF+R  LVIRY+D A++ V+E +     +  +  LY++A AI+ + T+   +WL+ KS P P A   F N T    ++       PY+  + +L++VSLI   +  +A
Sbjct:  114 CCPTGGTLKSEKDINGVTQTLGDHDPGS--CMTRWDKTRFMRHALVIRYLDCASNSVQETTLMALASTPASKLYEMARAIDTNITIKANNWLSHKSLPNPLAAQPFRNQTPPQALIKQ----KPYKILVFILLVVSLIFFAINPTA 253
[Close]
BLAST of mRNA_C-tenellus_contig7181.1.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 4.500e-16
Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 0 
Query:   32 CGPFGGTLTSFKTIDGMNQTLGDYDQSSPAAMKGWNKERFLRQTLVIRYIDKANDRVEEVSAFIEPNESSKNLYKVAAAIEASKTLTVKDWLAAKSKPT 130
            C P GG++ S K IDG+ QTLGD+D      M  W+K RF+R  LVIRY+D A+  V E  A   P+  +  LY++A +IEA+ T+ + DW  +KS PT
Sbjct:  166 CCPTGGSMYSEKDIDGVTQTLGDHDPGD--CMSRWDKTRFMRHALVIRYVDCASHSVLETRAMAHPSVPASQLYEMARSIEANITVRMTDWTKSKSLPT 262
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7181.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWP8_ECTSI3.170e-1738.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA59_9PHAE4.500e-1645.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 174..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7181contigC-tenellus_contig7181:2302..3331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7181.1.1mRNA_C-tenellus_contig7181.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7181 3..4079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7181.1.1 ID=prot_C-tenellus_contig7181.1.1|Name=mRNA_C-tenellus_contig7181.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=232bp
MLILPDADGKNLTPNIVVICLPSLGEPCSDCCGPFGGTLTSFKTIDGMNQ
TLGDYDQSSPAAMKGWNKERFLRQTLVIRYIDKANDRVEEVSAFIEPNES
SKNLYKVAAAIEASKTLTVKDWLAAKSKPTPGAFGAFNFTHEAIIMSTVF
SGTPYRASLGVLVLVSLIISIVTKSATGGVLQFLGIGVGLSGSFNVLGQG
AEQPSYNNDLRNIAAQALAGVIYIIGLSVAF*
back to top